Rhinichthys klamathensis goyatoka (western speckled dace): 130104321
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Entry
130104321 CDS
T09701
Symbol
cul3b
Name
(RefSeq) cullin-3b
KO
K03869
cullin 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04120
Ubiquitin mediated proteolysis
rkg04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130104321 (cul3b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130104321 (cul3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130104321 (cul3b)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130104321 (cul3b)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
130104321 (cul3b)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
130104321 (cul3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Stu2_CTS
DUF6655
Motif
Other DBs
NCBI-GeneID:
130104321
NCBI-ProteinID:
XP_056126758
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MSNLSKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVIHCLDKTTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLTSTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLA
KHSGRQLTLQHHMGSADLNATFHGPIKKEDGSDMVGGAQVTGSNTRKHILQVSTFQMTIL
MLFNNREKSTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHVFTVN
DQFNSRLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVL
VAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatctcagcaaagggggcactaaaaaagacaccaagatgaggatacgagccttt
cctatgaccatggatgagaaatatgtcaacaacatctgggatctcttgaaaaatgccatt
caggagatccagaggaaaaacaacagtgggctgagcttcgaggagctctacaggaacgcc
tacaccatggtccttcacaaacacggagagaagctctacacaggcttaagggaggtggtc
acagaacatctcatcaacaaagtacgcgaggatgtgttaaactccctgaataacaacttt
ctgcaaacactgaatcaagcctggaacgaccaccagacggctatggtgatgatcagagac
atcttgatgtacatggaccgggtgtatgttcagcagaataatgtagagaacgtctataat
ctaggtctcatcatcttcagagaccaggtggttcgatacggctgcattcgggaccatcta
aggcagaccttactagacatgattgcccgtgagagaaaaggagaggtggtggacaggggt
gccattcgtaacgcttgtcaaatgttaatgattttgggattggaaggacgttctgtttat
gaggaggattttgaggccccattcttagaaatgtctgctgaattctttcagatggaaagt
caaaagtttttagctgagaacagtgcaagtgtgtacataaagaaagttgaggcccgcata
aacgaggagattgagcgagtgatacactgtctggataagacgacggaggagccgatcgta
aaggtggtggagagagagcttatctccaaacacatgaagaccattgtagagatggagaac
tctggcctggtacacatgctcaagaatggaaagacagaagatttggcctgcatgtacaag
ttgttcagtagggtgccaaatggcctgaagaccatgtgcgagtgtatgagctcatatctg
agggagcagggcaaagctctggtgtctgaggaaggagaaggcaagaaccctgttgactac
atccagggccttctcgatctgaagtcacggtttgaccgcttcttgcaagagtctttcaac
aacgaccgtttattcaagcagaccattgcaggggactttgagtatttcttgaacctgaac
tctcgttcacccgagtatctctcgctcttcattgacgataagctgaaaaaaggagtgaaa
ggactgacagagcaggaggtggagtccatcttggataaagccatggtgctgttcaggttc
atgcaggagaaggatgtgtttgagcgctactacaagcagcacctggccagaagactcctc
accaacaagagtgtctctgatgactcagaaaaaaacatgatctcaaagctaaagacggag
tgtggctgtcagttcacatctaaactggaaggcatgttcagggacatgagcatctcaaac
acaaccatggacgagtttcggcagcaccttacgtcaacaggggtgtctttaggtggcgtt
gacctcacagtgagggttctgacgacaggatactggccaacacagtccgcaactcccaaa
tgtaacatccccccttcaccaagacatgctttcgaggtctttagaaggttttatttggcc
aagcacagtggtaggcagctcacattgcagcatcacatgggttcagcagacctcaatgct
acctttcatgggccaataaaaaaggaggatggctcggatatggtcggtggggctcaggtt
acaggctctaatactaggaaacacattctacaggtttccacattccagatgacaatcctc
atgcttttcaacaaccgagagaaatccacgtttgaggagattcagcaagagacggatatc
ccagagagagagctggtgcgggcactgcagtctctggcctgtggaaagcccacgcagcga
gtcctcactaaagagcccaagtcgaaagagatcgagagcggccacgtgttcaccgtcaac
gaccagttcaactccagattgcacagagtcaagattcaaaccgttgcagccaaacaggga
gaatcggaccctgagaggaaggagacgcgacaaaaggtggatgacgacaggaagcatgaa
attgaggcagctattgttcgaatcatgaagtccagaaagaaaatgcagcacaatgttctt
gtagcagaggtaacccagcagctgaaggcccggtttctcccgagtcccgtggtcattaaa
aagcgtattgaaggacttattgagagagaatacttggcaagaacaccagaagatcgcaaa
gtgtacacatatgtagcatga
DBGET
integrated database retrieval system
