Rhinichthys klamathensis goyatoka (western speckled dace): 130104387
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Entry
130104387 CDS
T09701
Symbol
adgrb1a
Name
(RefSeq) adhesion G protein-coupled receptor B1 isoform X1
KO
K04596
adhesion G protein-coupled receptor B1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04115
p53 signaling pathway
rkg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130104387 (adgrb1a)
09143 Cell growth and death
04115 p53 signaling pathway
130104387 (adgrb1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130104387 (adgrb1a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130104387 (adgrb1a)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rkg04030
]
130104387 (adgrb1a)
Peptidases and inhibitors [BR:
rkg01002
]
Mixed peptidases
Family P2
130104387 (adgrb1a)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Phagocytosis
Others
130104387 (adgrb1a)
G protein-coupled receptors [BR:
rkg04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
130104387 (adgrb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AGRB_N
7tm_2
TSP_1
TSP1_spondin
GAIN
TSP1_ADAMTS
GPS
TSP1_CFP_C
HRM
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
130104387
NCBI-ProteinID:
XP_056126858
LinkDB
All DBs
Position
Unknown
AA seq
1614 aa
AA seq
DB search
MISKFLRNCSSLVLLLPLLQLLRLDMLNAAPSGPESDTCSTLVQSRFFGFFLSSAVYPST
PCSWTLQNPDPRRYTIFIKVTKPTRDCIPRQHRTFQFDSFLETTRTFLGMESFDEVVKLC
DASTHVAFLEAGKQFLQIRKGLPRVGAGSRNGDGEFKVEYLVVGKRNPSMAACQMLCQWL
EDCLTYSTSNRPCGIMQTPCQCWDQPPPDKETNGCYRDGVYLENCIPVVKEGTADTDTSG
GWSVWGNWAECSSECGGGVQTRSRTCQSPPEEAYLCEGVLEEGRPCNSQSCIGYRQYSSK
GKGLSPVKYKGMQEAMLGKGRLGTRSQSLRSVDSRKREDSDKTRSGQQSSQTVDPPSGEE
WSAWSVCSATCGEGWQSRTRFCVSVSYSTQCSGPLREQRPCNNTAVCPAALIAVHGAWDE
WSPWSLCSSTCGRGYRDRTRSCKPPQFGGNPCDGPEKQTKFCNIAVCPVDGVWNEWSNWS
SCSSSCSNGTMQRTRECNGPSYGGLECQGEWRQTRDCFLRECPVDGQWQLWSSWAGCTKT
CGGGSQQRQRVCHGPFFGGEPCPGDREEVKRCNEKRCPEPHEICDEENFSNVVWKKTPSG
DTAAVRCPPNAVGLILRRCSLDDEGIAYWENPTYMKCVSNDYRSIQTLTRDHLSKAQRGL
VGDGVSEVMTKLRVTSSDGTSYSGDLLAIIDVLKNMTEIFRRSYYSPSNTDMRNFVQSVS
NLLMEENRDRWEEAQLLGPNIKELFRLVEDFVDVISLRMKDFQDTYEVTDNLVLSIHKRP
VAGNADITFPMKGWRGMVDWARNSEDKVRVAKNILVTGNPDEDDASAFVTGIVLYRNLGS
ILSLQRNSTVLNSKMISVTIKPTPNTLSTPLEIEFSHLYNGTTNQTCISWDENDSSSLLG
SWSARGCRAVPVDSSTTKCLCDRLSTFAILARLNPDVNMDKSQLPSVTLIVGCGVSSLTL
LLLIIIYVSVWRYIRSERSVILINFCLSIISSNALILIGQTQTRNKVVCTLVAAFLHFFF
LSSFCWVLTEAWQSYMAVTGRLRNRIIRKRFLCLGWGLPALVVAISVGFTKAKGYGTVNY
CWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSKDGITDMKLKERAGQMTVPLYNM
TLKCAKCGVISSADVSTTATSNAMASLWSSCVVLPLLALTWMSAVLAITDRRSALFQILF
AVFDSLEGFVIVMVHCILRREVQEAVKCRVVDRQEEGNGDSGGSFQNGHAQLMTDFEKDV
DIACRSGTLKRSSQQGEEKVASQQITVQKGSNFNTLPASMAKVHLQNVADYASHTLTMRR
DKGGIAGVSTELPGAKSIYICDGELFKQLDGAPGDSGGLEGGGGGGSGQGYVLLPNNNNT
LRPSKGGKEDQTTKYNIGIEQLPQTRLIHLANPAGTDPVPGFGLKSLPTDRVSISCSERD
SPGQTVQNISSESQMINSCEQGDSGNSGMMSKSETISTLSMSSLERRKSRYAELDFEKIM
HTRKRHQDMFQDLNRKLQHAEKDRDSPPVDGKPGKRWSVSSGGSDKTNLSDKQQTPSKRV
WEGIRKTHSPPSWVRKELEPLQASPLEMQAVEWEKASATIPLVGQEIMDLQTEV
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgatatcaaaattcttacggaactgttcatcgttggtgctgctgttacctcttctccaa
ctgctgcggctggacatgctcaacgctgctccctctggtccggagtctgacacctgctcc
acattggtccagagccgcttctttggattcttcctctcgtctgctgtatatcccagcacg
ccctgctcttggaccttgcagaaccccgacccacggcgctacaccatcttcatcaaggtc
acaaaaccaaccagagactgcattcctcgacaacaccggaccttccagtttgactccttc
ttggagacaacacgaaccttcctcggaatggagagcttcgacgaggtggtgaagctgtgt
gatgcttctacccacgttgccttcctggaagctgggaaacaattcctgcagatccggaaa
gggctgcccagagtaggtgctgggtccaggaatggggatggggaatttaaagtggagtat
cttgtggttgggaagcgtaaccccagcatggctgcctgtcaaatgctgtgccaatggttg
gaggactgccttacctacagtacctccaaccggccctgtggcatcatgcagacaccatgc
caatgttgggaccagcccccgccagacaaagaaaccaatggatgctaccgagatggggtc
tacttggagaactgcatccctgttgtgaaagaaggaaccgctgacactgacacaagtggt
ggctggagtgtttggggcaactgggcggagtgcagcagtgaatgtgggggcggagtccag
acgcgctcacggacctgtcaatcacctcctgaggaggcgtacctgtgcgaaggtgttctt
gaagaaggtcgtccctgcaactctcagtcgtgcattggctacaggcagtattcctctaaa
ggcaagggtttaagtccagtgaaatacaaaggaatgcaagaggccatgcttggcaaaggc
agacttggcactcgtagccaatccctgcgctcggtggacagccgtaaacgagaggactct
gataagacccgcagtggacagcagtcttcccaaacagtggatcctccgtcgggtgaggag
tggtctgcgtggagcgtgtgttcggccacgtgcggtgagggctggcagagccgcacacgc
ttctgcgtctccgtgtcgtacagtacgcagtgcagcgggccgctgcgcgaacagagaccc
tgcaataacactgctgtgtgtccagccgctctgattgcagtgcacggggcatgggacgag
tggtctccatggagcttgtgttcttcaacgtgcggccgcggctacagggaccgcactcgc
tcctgcaagccaccacagttcggaggaaacccctgtgacggtccggagaaacagaccaaa
ttctgcaacattgctgtatgcccagtggatggagtgtggaatgagtggtccaactggagt
tcctgttcctcgtcctgttcgaatggaacaatgcagcgcactcgggaatgtaacggcccc
tcgtacgggggcctagagtgtcagggcgagtggcgtcagacacgtgactgcttcctcaga
gagtgtcctgtggatggccaatggcaactctggagctcttgggctggttgtaccaaaact
tgtggtggaggaagccagcagagacagagggtgtgtcatgggcccttttttggaggggag
ccatgcccaggggacagagaggaagttaaacgttgcaatgagaagaggtgtccagagccg
catgagatttgtgacgaggagaatttctctaacgtagtgtggaagaaaacaccttcaggg
gacacggcggctgtccgctgccctccgaatgctgtaggactaattcttcggcgatgttcg
ttggacgatgagggcattgcatactgggagaacccgacttacatgaagtgtgtctcaaat
gattaccgaagtatccaaacactgaccagagatcacctttccaaggctcaacgagggctt
gtgggcgacggggtctctgaagtcatgacaaagctgagggtgacgtccagtgatggaaca
agctacagtggagaccttctggctatcatagatgtactgaaaaacatgacggagatattt
aggaggtcctactacagccccagtaatacagacatgaggaattttgtgcagtcagtgagt
aacttactgatggaggaaaacagggacaggtgggaggaagcacaactgctcgggcccaat
attaaggagctttttcgtctagtggaggactttgtggacgtcatcagtctccgcatgaag
gacttccaggatacttatgaggtcaccgacaatctggtgttgagtattcacaagaggcct
gttgcgggaaatgcagatatcactttcccgatgaaaggatggagggggatggtggactgg
gctcgcaactctgaggacaaagtcagagtggctaaaaacatcctggtcactggaaatcca
gatgaagacgacgcatcagcatttgtgactggcatcgtactgtacagaaacttgggcagt
attctctctttacagagaaatagcacagtgctgaactccaagatgatctctgtgacaatc
aaacccactcccaatactctatcaactcctctagagattgagttctcacacctttacaat
ggtaccacaaaccaaacctgcatttcctgggatgagaatgacagctcgtcgttgctgggc
tcctggtctgcgcgaggctgtagagccgtgcccgtcgactccagcacaaccaaatgcttg
tgtgacagactctccaccttcgccattttagcacgcctcaatcccgatgtgaacatggat
aagtcccagcttccatctgtgactctgatcgtgggctgcggggtgtcgtccctcaccctg
cttctcctcatcatcatatatgtgtctgtttggaggtatatccgctcagaacgttctgtc
atcctcatcaacttttgtctgtccatcatctcctccaatgcactcatacttattggacaa
acccagacacggaacaaggttgtttgtactcttgtggctgcatttctgcacttcttcttc
ctgtcctctttctgttgggttctcacggaggcatggcagtcttacatggccgtgactggc
cgtcttagaaaccgcatcatacgcaagcgtttcctctgccttggttggggtttacctgct
cttgttgttgcaatttctgttggattcaccaaggcaaagggatatggcactgttaactat
tgctggctgtctctggaaggtggactgttgtatgcatttgtgggaccagctgctgctgtc
gtcttggttaacatggtaatcgggattctggtttttaacaaactggtgtccaaagatggc
ataactgatatgaaactcaaggagagggccggtcagatgacagtgccactgtacaatatg
acgctcaaatgtgccaagtgcggagttatctcgtcggctgacgtttccaccacagctacc
agtaacgccatggcgtcgctgtggagctcctgtgttgtgcttccactgctggctctcact
tggatgtcggcggtcctggccatcactgaccgccgctcagccttgtttcagattcttttt
gctgtctttgactctctcgagggcttcgttatcgtgatggtgcattgcatcctacgcaga
gaggtccaagaggcagtaaagtgtcgcgttgttgatcgtcaagaagagggaaacggtgac
tctggtggatctttccagaacggccatgctcagctgatgactgactttgaaaaggatgta
gacattgcttgccgatcaggcaccctgaagcgttcctcccaacaaggcgaggagaaggta
gcttcacagcagatcacggtacagaaaggctccaacttcaacacccttcctgccagcatg
gcaaaggtccacctgcaaaacgttgccgattacgccagccacactctcaccatgcgccgc
gacaaaggcggcattgcgggggtcagcactgaactgcccggagccaaatctatttacatc
tgtgacggcgagctcttcaagcagctggacggagctccaggagacagcggcggtcttgaa
ggcggcggaggaggagggtcgggccagggttacgtgctcttgcccaacaacaacaacacc
cttaggccctcgaagggtggcaaggaggaccaaaccaccaagtacaacatcggcatcgaa
cagttaccccagaccaggctcatccacctggccaaccctgctggcaccgatcccgtgcca
ggcttcgggctaaagagcttgcccaccgacagagtcagcatttcctgctcagagagggac
tccccagggcagacagtgcagaacatctccagtgaatcccagatgataaacagttgtgag
caaggggactctgggaactccggcatgatgtctaagagcgagaccatctccacactgtct
atgagctctttggagagacgaaaatcacgctatgcagagctggactttgagaagatcatg
catacacggaagcgccaccaggacatgttccaggatttaaacaggaagctgcagcatgca
gagaaggacagagattctcccccggtggatgggaagcctgggaagagatggagtgtgtcg
tcaggaggcagcgataaaaccaaccttagtgacaagcagcagacccccagtaagcgggtg
tgggagggcatcaggaagacccactccccaccatcatgggtgcgcaaggagctggagccc
ctacaggcctctcccctggagatgcaagcggtggagtgggagaaggccagtgccaccatc
cctctggtgggccaagagatcatggacctgcagacggaggtctga
DBGET
integrated database retrieval system
