Rhinichthys klamathensis goyatoka (western speckled dace): 130104396
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Entry
130104396 CDS
T09701
Symbol
ptprub
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130104396 (ptprub)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130104396 (ptprub)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130104396 (ptprub)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130104396 (ptprub)
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
Type II RPTP family
130104396 (ptprub)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
Ig_DSCAM-DSCAML_C
DSPc
Pur_ac_phosph_N
Tc-R-P
Y_phosphatase3
Ig_3
PTPlike_phytase
I-set
ig
Ig_2
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
130104396
NCBI-ProteinID:
XP_056126881
LinkDB
All DBs
Position
Unknown
AA seq
1450 aa
AA seq
DB search
MNTCAFLLILAVQIHADSVEGPTAGCTFDEDSDPSLCEFSQGEEDDFDWQLFRAHASPHS
TSDLLRGSYMMVNSSQHAAGQRAQLLLQTLSENDTHCVQFSYFLYSRDGHSPGALRVYVR
VNGGPLGIPVWNVSGSRGRQWHQVELAVSTFWPNEYQILLEATVDRRGYIAVDDILLLNY
PCYKSPHFSRLGDVEVNAGQNATFQCVAAGRPSEAEKFLLERHNGEVSSGGSVKHLGRNR
FAVSFQLEDVQKPEQDLYRCVTQSSRGSGVSNFAELIVKVPPSPIAPPQLLRAGSTYLII
QLNTNSILGDGPIIRREIEYRASQAPWSEILGVNMVTYKLWHLDPDTEYHISVLLTRPGE
GGTGPSGPPLISRTKCAEPMRALRGLRASEIQSRQLTLQWETPAFNLTRCHTYSVSLCYR
YTTAGGGGGHNTTVRECLAVEHNTSRFTLRDLPPFHTIQIRLALANTEGKKEGKEVVFQT
EEDIPGGIAPESLTFTPLEDMIFLKWEEPVEPNGLITQYEISYQSIESSDPGINVPGPRR
TVSKLRNETYHMFSNLHPGTTYLISVRARTAKGFGQTALTEITTNISAPTFDYGDMPSPL
SETESTITVLLRPAQGRGAPVSTYQVIVEEEAGRKVKRELGVQDCFPIPTSHGEAQARGA
PHYYTAELPPSSLPEATPFTVGDNHTYNGYWNTPLDPRKNYLIYFQAMSNFRGETRINCI
RIARKAACKDHQRALEVTQRSEEMGLILGVCAGGLVVLILLLGAIIIIIKKGRDYYSYSY
YPRKPVNMNKTPITYRQEKSNMMGSMERSFTDQSTLQEDERMALSFMDTHTCSTRSDPRS
SMNESSSLLGGSPRRQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESF
FDGWDINKKKDKTKGRNDTLMGYDRHRVKLHPLLGDPNSDYINANYIDIRINREGYHRSN
HFIATQGPKQETVYDFWRMVWQENCFSIVMITKLVEVGRVKCCKYWPDESEMYGDIKITL
LKTETLAEYTVRTFALERRGYSAKHEVCQFHFTSWPEHGVPYHATGLLAFIRRVKTSTPL
DAGPVVVHCSVGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIF
IHDAILEACLCGETAIPVNEFALAYKEMLRVDSQSNSSQLREEFQTLNSVTPHLDVEECS
IALLPRNREKNRSMDVLPPDRALAFLVTTEGESNNYINAALMDSFHRPAALIVTPHPLPG
TTSDFWRLVFDYGCTSVVMLNQLNQSNSAWPCVQYWPEPGLQQYGPMQVEFLSMSADEDI
ITRLFRVKNVTRLQEGQLVVCQFQFLRWSAYRDVPDSKKAFLNLLASVQKWQRECGEGRT
VVHCLNGGGRSGMYCSSNILMEMIQYQNMVDVFYAVKTLRNAKPNMVETLEQYRFCYELV
LEYLDCLEVR
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgaatacctgcgcatttctcttgatcctggctgttcagattcacgccgacagcgtagag
ggaccaacagcgggctgcacgtttgatgaagactccgaccccagtctgtgtgagttcagc
caaggggaggaggatgactttgattggcagctgttccgcgctcacgcctcgccacactcc
acctctgatctcctgcgcggctcctacatgatggtcaactcctcccagcatgcagcgggg
cagagggctcagcttctgctgcagactctaagcgaaaacgacacgcactgcgtgcagttc
agctacttcctgtacagcagagacggccacagcccgggggcgctgcgggtttatgtgcgg
gtcaacggtgggccgcttggcattcccgtatggaatgtctctggctcacgtggacgacag
tggcaccaggtggaactggcagtcagcactttctggccaaatgagtaccagatattgcta
gaggcgactgtggaccgcagaggctacattgcagttgatgacatactcctattgaactac
ccctgttataaatctcctcatttctctcgcttgggagacgtggaggtcaacgctggacaa
aacgccactttccagtgcgtagcagcaggacgtccctctgaagcagagaagttcctgttg
gaacggcacaatggtgaagtgtcctcaggtggttctgtcaagcacttgggccgcaaccgc
ttcgcagtgtcctttcaactggaggacgtccagaagccagagcaggacctctaccgctgc
gtcacacagtcctccagaggctccggcgtctccaactttgctgaactcattgtcaaagtt
cccccatctcccattgctccgccccagctgttgagagcaggctccacgtatttgatcatt
caactaaacaccaactccatcctgggcgatggccctatcatccgtcgggaaatcgaatat
cgggccagccaggcaccctggtcggagatccttggagttaacatggttacatataagctc
tggcacctggatccagacacggagtaccatatcagtgtgctgcttactcggccgggtgag
ggtgggaccgggccatctggaccacccctcatcagcagaaccaagtgtgcagagcccatg
cgagcgctgcgtggtcttagagcctcggagatccagtcccggcagctgaccttgcagtgg
gagactccggccttcaacctgacccgctgccacacgtactccgtctccttgtgctaccgt
tacacgaccgcagggggtggcggtgggcacaacaccacagtgagagaatgcctggctgtg
gagcacaacacttcgcgtttcaccctcagagatctgcctccttttcacaccatccaaata
cgcctggcactcgccaacacagagggcaagaaggaagggaaggaggttgtgtttcaaact
gaggaggacattcccggtggcattgctcccgagtctcttaccttcacgccgctggaggat
atgatcttcctgaagtgggaggagccggtggaacccaacggcctcatcacgcagtatgag
atcagctaccagagcattgaatcatcagaccccgggattaatgttccaggcccgaggcgc
actgtatccaagctgaggaacgagacgtaccatatgttctccaacctgcatcctggcacc
acctacctgatctctgttcgggcgcgcaccgccaaaggcttcggccaaacagctctcact
gagatcaccaccaacatctctgcaccaacattcgattacggagacatgccgtcccctctg
agtgagacagaaagcaccatcacagtcctgctgcgtccagcacaaggccgaggagctccg
gtcagcacgtatcaagtgatcgtggaggaggaagctggtaggaaggtgaagagagaactg
ggtgttcaggactgctttcccattcctacatctcacggtgaggctcaggcccgtggagct
ccacactactacactgccgaactgcccccgagcagcctgcctgaagccacaccatttact
gtgggggacaaccacacctataacggctactggaacacccccctggaccccaggaagaac
tacctcatctacttccaggccatgagcaacttcagaggcgaaacaaggataaactgcatc
cgcatcgcccgtaaagccgcctgtaaagaccatcagcgtgctcttgaagtcactcagcgc
tcagaggagatggggctcatcctaggagtgtgtgctggtgggctggtggtcctgatactg
ctactgggggccattatcataatcattaaaaaaggaagggattactactcatactcttat
tatcctaggaagccggtgaacatgaataagacccccattacgtacaggcaggagaagagt
aatatgatgggctccatggagcgcagtttcactgatcagagcactctgcaggaggacgag
aggatggccttgtcatttatggacacccatacgtgcagcactcgcagtgatccacggagc
tccatgaatgagtccagcagtctgctgggtgggtcgcctaggcgtcagtgtggccgtaaa
ggatcgccctatcacacgggtcagcttcaccctgcagtgcgtgttgctgacctcctacaa
cacatcaaccagatgaaaaccgcagaaggttacggttttaaacaggagtatgagagcttc
tttgatggctgggatatcaataagaagaaggataaaactaagggaagaaacgataccctg
atgggttatgaccgtcacagggtgaaattgcacccgctgctcggtgatcccaactccgac
tatatcaacgccaattacatcgatattcggataaacagggaaggttaccatcgatccaac
cacttcatcgccactcaggggcccaagcaggagacagtgtatgatttttggaggatggtt
tggcaagagaactgctttagtatcgtcatgatcaccaagctagtggaggtgggcagggtg
aaatgctgtaagtattggccagatgagtcagagatgtacggtgacataaagatcacgctg
ctgaagacggaaactctagcggagtacacagtgcgaacttttgccctggagcggagggga
tactccgccaaacacgaagtgtgtcagtttcactttacatcatggcctgagcatggagtc
ccataccacgccacaggtcttctagccttcattcgccgggtcaaaacctccacgccactc
gacgcagggcctgtggtggtccactgcagtgtgggggcgggcaggaccggctgctatatc
gtgctggacgtgatgctggacatggccgagtgtgaaggagtggtggacatctacaactgt
gtgaagaccctctgctctcgtcgaatcaacatgatccagacagaggagcagtacatattc
attcatgatgccatcctggaggcgtgtctgtgtggggagacggccatccctgtgaacgag
tttgccctggcttacaaagagatgctgcgggtggattctcagagcaactcttcacagctt
cgagaggagttccagacgctaaactctgtgacacctcatctggacgttgaggagtgcagc
atcgctttgttaccacgaaaccgcgagaagaaccgcagcatggacgttctccctcctgac
agggccctcgcctttctggtgaccaccgagggcgagagtaacaactacattaatgcagca
ctgatggatagtttccacaggcccgctgctttaattgtaacccctcacccgctgcccggc
acgacctctgacttctggaggctggtgtttgactacggctgcacctctgtagtcatgctg
aatcagctgaaccaatctaactctgcctggccttgtgtgcagtactggcctgaaccaggt
cttcagcagtatggtcctatgcaagtggagtttctgtccatgtctgcagatgaggacatc
atcacccgccttttccgggtcaaaaatgtgacgagactgcaggagggtcagctggtcgtg
tgccagttccagttcctgcgctggtctgcgtatcgtgacgtgcctgactccaaaaaggcc
ttcctcaacctgctggctagcgttcagaagtggcagagggagtgtggggaaggtcgtacg
gtggtccactgcctgaacggcggtggtcggagtggaatgtactgttccagcaacatcttg
atggagatgatccaataccagaacatggtggacgtcttctatgctgtcaagactcttcgt
aacgctaagcccaacatggtggagacactggagcagtatcgtttctgttatgagctggtt
ctggagtatttggactgcttggaggtcagatag
DBGET
integrated database retrieval system
