Rhinichthys klamathensis goyatoka (western speckled dace): 130104490
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Entry
130104490 CDS
T09701
Symbol
hcn4l
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130104490 (hcn4l)
Ion channels [BR:
rkg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
130104490 (hcn4l)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
DNA_pol_viral_C
Motif
Other DBs
NCBI-GeneID:
130104490
NCBI-ProteinID:
XP_056127025
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MHPSMRKRLYSLPHQFGYKGAMTRDGEDSDKDTRRKSVKMKHLPSTGSSKGVSEAKSGDA
ETDVGRPFRTNVNGDCRRFRGSLSSITSRHASDADLAEQRRLIGDASPEDEGPLEHTGPG
ESQGAQGGRGDGAQQAPSEEQSTFVKLEGIDQILPDDERLYQAGFMHRQFGAMLQPGVNK
FSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWDLIMLLLMVGNLIIIPVGITFFK
DEHTPAWIVFNVVSDTFFLVDLVLNFRTGIVKEDSTEIILDPQQIKVKYLRSWFAVDFIS
SIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMT
YDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVAKNKMVNDTWGQQYSYA
LFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMFVGHATALIQSLDSSRRQYQ
EKYKQVEQYMSFHKLPTDMRQRIHDYYEHRYQGKMFDEESILGELNEPLREEIISFNCRK
LVATMPLFANADPNFVTSMLTKLRFEVFQPGDYIIKEGTVGKKMYFIQHGVLTVLTKGSK
ETKISDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNEVLEEYPMMRRAFETVAL
DRLDRIGKKNSVLQHKVQRDLNSGVLNYQENEIIQQIVQHDRDMAHCAHLMQTPPPAPHP
APTPSSHTPVIWAPLIQAPLQAAAATSSVAIALTRHPHLPHSLFRPPVPLLGSLKDQPGY
VKRFPTALSGAAAFSGSSSTSSQFSSCIETPILDTLRAERSSTSTPPPPSSSSLPSTITT
TVTTTTSSITESSFYPHRPLVSHGSKDFSVAQLHSQPQLPQASFPSIAASLRGFFQQGAV
GGEAVQLSVPPTSTLTPLIAHSVSPILTQLHSAQPNPQPTKPSQGLNKVKRTASQSPVTE
SPIHSRSILEQVSGPTSPISSQQVPSQHTPISLQPDVLSQLSQEPSALASLAQYGSGNVS
PCSTPSAWSPTRQSPTVEKMRMSMHSNPASISGSQSSLITPQTLFPPPPQTRQRGGSLVD
LPSQDLTTISKSLPTPGLPEKSKLVGRGPEPPDLSHHRGSASGYSPLPSPPPIMKPFSSI
PGHVVLSRQTSKLSITQTGSSGGSPAHGSSDRSTPGTPSLHPKLPSNL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgcatccttccatgcgcaaacgactctatagcttgccacatcagtttggatacaagggt
gctatgactcgagacggtgaagacagcgacaaggacactcggaggaaaagtgtcaagatg
aagcatcttccctccacggggagctctaaaggtgttagcgaggccaagagcggagacgcg
gagaccgatgtggggagacccttcagaaccaacgtgaacggggactgccggaggttcagg
ggcagcctctcttccatcaccagccgacatgcttcagacgcggatctggcggagcagagg
cgcctcatcggggatgcgagccctgaggatgaaggtcccttggagcacaccggacctggg
gagagccagggcgcgcagggcggtcgcggcgacggggcacagcaggcgccctctgaagaa
cagtcgactttcgtaaagttggagggtatcgatcagatcctgccggacgatgagaggttg
taccaggcgggctttatgcacaggcagtttggagcgatgcttcaaccgggagtcaacaag
ttctcgcttcgaatgttcgggagcgagaaggcagtggagcgcgagcaagaacgggtcaaa
tctgcaggcttttggatcattcacccatacagtgacttcaggttctactgggacctgatc
atgctcctcttgatggtgggcaacttgatcatcatccccgtaggcatcaccttctttaaa
gatgaacacacccccgcctggatagtctttaacgtggtctctgatacattcttcctggtt
gacttggtgctgaacttccgcaccgggatcgtcaaggaagacagcacggaaatcatcctg
gaccctcagcagatcaaggtgaagtaccttcggagctggttcgctgtggatttcatctct
tccatccctgtggattacatcttcctcattgtggagacacgaatcgactcggacttctac
aagacggcacgagcgttgaggattgtgcgtttcactaaaatactcagtcttctccggcta
ctgagattgtccagactcattagatacatccaccaatgggaggagatttttcacatgacc
tatgacctggctagtgccatggtgcgcattgtgaatctcattggaatgatgttgttgctg
tgccactgggacggatgcttgcagttcctggtgcccatgctgcaggatttcccttcagac
tgctgggtggccaaaaacaaaatggtgaatgacacatggggtcagcagtactcttatgcc
ctgtttaaggccatgagccacatgctgtgtatcgggtatggcatgtaccctcccgtgggc
atgacggatgtgtggctgaccatcctcagcatgatcgtgggcgcaacctgctatgccatg
tttgtgggccacgccaccgccctcattcagtcactggactcctcacgcaggcagtaccag
gagaagtacaaacaggtggagcaatacatgtccttccacaaacttcctacagacatgcga
cagaggatccatgattactatgagcatcgctatcagggcaagatgtttgacgaggagagc
attctgggagaactaaacgagccgctcagagaggaaatcatcagttttaactgtcgaaag
cttgtggccaccatgccgttgtttgccaacgcagatcccaactttgtgacctccatgcta
acaaagctacgtttcgaggtgttccagccaggagattacattatcaaagaggggaccgtc
ggaaagaagatgtatttcatccaacacggtgtactaactgtcctgacgaagggcagcaaa
gagacaaagatctcagacgggtcttactttggagagatctgtttgctgactcgaggcaga
agaacagccagcgtcagagcggacacatactgtcgtctgtactcactctctgtggaccat
ttcaacgaggtgttggaggagtaccctatgatgcgacgcgcctttgagaccgtagccctc
gatcgccttgaccgaataggaaagaaaaactctgtcctccagcacaaggtccaacgggat
cttaattccggagttctgaactaccaagaaaacgagatcatccagcagattgtgcagcat
gacagggatatggcccattgtgcccacctcatgcagacaccacccccagctcctcaccca
gcaccgacaccatcttcccacacccccgtcatctgggcacctcttattcaggctccacta
caagctgccgcagccaccagttccgtagccattgccctgactcgccacccccatttgccc
cattccctcttccgaccccctgtcccgctgcttggctcgctgaaagaccagccaggatat
gtaaaaaggttcccaactgcactttcgggcgctgctgcatttagtggctcctcatcaacc
agctcacagttcagctcttgtatagagaccccaattctggacacactcagggccgagaga
tcatctacctccacacctccaccaccgtcctccagctctctgccatccaccatcacaaca
actgtcaccactaccacctccagcatcacagagtcttccttctaccctcatagacccctt
gtctcccacgggtccaaagacttcagtgttgcccagcttcattctcaaccacaacttcct
caggcctctttccccagcattgctgcatcacttcgtggtttcttccaacaaggagcagtt
ggaggagaggctgtccagctttcagttccccctacatccacccttactcctttgatagcg
cactctgtaagtcccatcctgacccaactgcattcagctcagccaaatcctcaaccaaca
aaaccaagtcaaggcttgaataaagttaaaaggacagcctcccagtctcctgtaacagaa
tcccctatccactccaggagcattcttgaacaagtctcgggtccaacaagtcccatctca
tcccaacaagtcccatcccagcacactccgattagtctacagccagatgttctttcccag
ctttcccaagaaccatctgctcttgcttcccttgcacaatatgggtccggaaatgtgtcc
ccatgtagcacaccttcagcttggagtcccacgcgccagagtcctacagtggagaagatg
aggatgtccatgcacagcaaccctgctagcatctctggatcccaaagctcactcataacc
cctcagacactctttccaccaccacctcaaacaagacaaaggggtggatctctagttgac
ctaccttcacaagacttaaccaccatttccaagtccctccccaccccaggactacctgaa
aagtccaagttagttggaagaggaccagaaccgccagacttatcccatcacagaggatcg
gcttcaggttactcacctctcccatcgccccctccgattatgaaaccatttagctcaata
cctggtcatgttgtcctatcgagacaaacttccaagttgtccataactcagactgggtcc
tcaggtgggtcaccagcccatgggtctagtgataggtccacccctgggacaccaagctta
cacccaaaactcccatcgaacttgtga
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