Rhinichthys klamathensis goyatoka (western speckled dace): 130104505
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Entry
130104505 CDS
T09701
Symbol
mre11a
Name
(RefSeq) double-strand break repair protein MRE11
KO
K10865
double-strand break repair protein MRE11
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03440
Homologous recombination
rkg03450
Non-homologous end-joining
rkg04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130104505 (mre11a)
03450 Non-homologous end-joining
130104505 (mre11a)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
130104505 (mre11a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rkg03032
]
130104505 (mre11a)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130104505 (mre11a)
DNA replication proteins [BR:
rkg03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
130104505 (mre11a)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
130104505 (mre11a)
BRCA1-C complex
130104505 (mre11a)
NHEJ (non-homologous end-joining)
MRX complex
130104505 (mre11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
DUF6823
Motif
Other DBs
NCBI-GeneID:
130104505
NCBI-ProteinID:
XP_056127049
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MTSAGNTIDDEDTFKILIATDIHLGYLEKDAIRGNDTFVTFDEIMKQAVQNEVDFVLLGG
DLFHDNKPSRKTMHSCMEVMRKYCMGDRPIVFEIISDQAVNFSHSKFPWVNYLDNNLNIS
IPVFSVHGNHDDPTGADGLCAIDLLSCAGLVNHFGRGHSVEKLEVSPVLLQKGNTRIALY
GIGSIPDERLYRMFVNNQVTMLRPREDEDAWFNLFVIHQNRSKHGATNYIPEQFLDDFLD
LVVWGHEHECKIAPVRNEQQLFYVTQPGSSVITSLSPGEAVKKHIGLLRVKGKKMNLQKI
PLQTVRQFFIQDVTLSDHPDLFSPEQPNVMLKVMAYCQEKVEEMLEEAERERLGNPLTPE
KPLIRLRVDYSGGFEVFNTMRFSQKFVDRVANPKDILHFIRHREAKDNIKEEGLDFGALL
SRPNSEVLQLRVEDLVKEYFQTAEKNVQLSLLTEQGMGKAVQEFVDKEERDAIEELINYQ
LEKTQRFLRERRVEATEEKIDEEIRQFRDSKRNTTEEDEEVQEAIIRAKANRDRSETLRG
DDLNLSDEPADIAMESDEESISAPPIRGRGRSSRGRGDHSTSKRGRGRGAASKSGRGGRG
QKGSLSSPLKTKSIMDAFQASTQRTSRGNTSKLDAEEITIEDSDSDDNVSFLKSSRTKQK
LPSLSSSKRGSQSQSQSFKGVCFDDDDDEDEFDPFKGSRRQRK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagctggaaacaccattgatgatgaggacacattcaagatcctcattgccact
gacattcacctaggttatctggagaaggatgccattagaggaaatgacacgtttgtgacc
tttgacgagatcatgaaacaagctgtgcaaaatgaggttgactttgttttgctgggtggg
gatctgttccatgacaataagccatcccgcaaaactatgcatagctgcatggaggtgatg
aggaagtattgcatgggtgaccggccgatcgtctttgaaatcatcagtgatcaggctgtc
aatttcagccacagcaagtttccatgggtgaactacttggacaataatctcaacatttcc
atccctgtcttcagtgtgcatggtaaccatgatgacccaactggggctgatggtctatgt
gctatagacctgttgagctgcgctggtctggtcaatcattttggccgcggtcattcagtg
gagaaacttgaggtcagtccagttcttctgcagaaaggaaacaccaggattgcactctat
ggcattggttccattccagatgagagactctaccggatgttcgtcaataaccaggtgaca
atgcttcggccacgagaggatgaagatgcctggttcaatttatttgtcatccatcaaaac
aggagtaagcatggggcgactaactacatcccggaacagtttttagatgatttcctggat
ttggtggtgtggggtcatgagcatgagtgtaaaattgctccagtccgtaacgaacaacag
ctcttctacgtcacacagcctggcagctccgtcattacctcactgtcaccaggagaagcg
gttaaaaagcacattgggttgttgagagtgaaagggaaaaaaatgaatcttcagaaaatt
cctttacagaccgtcaggcagttcttcattcaggatgtaacactctcagatcaccctgac
cttttcagcccagagcaacccaacgtcatgctcaaagtcatggcttactgccaggagaag
gttgaagagatgcttgaagaggcagagcgagagagacttggaaatccccttactcctgag
aaacctctcatcagactacgagttgattacagtgggggttttgaagtgtttaacactatg
cgctttagtcagaaatttgtagatcgagtggcaaatcccaaagacatcttgcatttcatc
agacacagagaggccaaagacaacattaaagaagaaggtttggattttggagcactcctc
tctcgtcccaattctgaggtcttacagctgagagtggaagatcttgtgaaggaatacttc
cagacagctgagaagaatgtgcagttgtctctgttgacggagcaaggcatgggaaaggca
gtgcaggagtttgtggataaggaggagagagatgctattgaagaactcataaactaccag
ctggagaaaacccagcgcttcctcagagaacgacgggtggaagccacagaggagaagatt
gatgaggagattcgacagtttcgagactcaaagagaaacacgacagaagaggatgaggaa
gttcaagaggctataatccgtgcaaaagctaatagggatcgcagtgaaactttgagaggt
gatgacctcaacctatcagacgagccagctgacattgctatggagtctgatgaagagtcc
atatctgctcctccgatccgtggaagggggcgcagctccagaggacgaggagatcatagt
actagcaaaagaggaagagggagaggtgctgcctcaaagtcagggcgggggggacgtgga
caaaaaggatctctctcaagtcccctaaaaaccaagtcaataatggatgcattccaggct
tcaacccagaggacctctcgtggaaacacatcaaagttggatgccgaggagatcaccata
gaggacagtgactcagatgataatgtttcatttctaaaaagttccaggacaaaacaaaag
ctgccttcattaagctccagtaagagaggttcccagagccagagccagtcttttaaagga
gtatgctttgatgatgacgacgatgaggatgagtttgatccattcaagggttcaagacgg
cagcgcaaatga
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