Rhinichthys klamathensis goyatoka (western speckled dace): 130104541
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Entry
130104541 CDS
T09701
Symbol
tsku
Name
(RefSeq) tsukushi isoform X1
KO
K08130
tsukushi
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rkg00535
]
130104541 (tsku)
Proteoglycans [BR:
rkg00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
130104541 (tsku)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_EndoS
LRR_LRWD1
LRRNT
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
130104541
NCBI-ProteinID:
XP_056127121
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MLTMATLLCLFFSVLGLAVMGAVKNCHPQCRCEVESFGLFDSFSLTKVDCSGIGPGNAPI
PIPLDTSHLDLSLNSITSISDSMLSGPGYTTLVSLDLSSNVIAHVSPKAFSKLRYLETLD
LSNNALEGLGDGCFTGLPLVELDLSENQFKEFSLDLFTTRAQDIPIMVDLSQNLLTSINR
RTPGHPLYIKSLMLAGNRLKTVPTLNGIPLQYLNLDGNLISSIDAGAFDSMTELVHLSLS
GLSVLTLIQPGAFRGLRNLQVLDLSNNSRLKTLSPDVFSGLVSLQELHLSNTAVTPLSRT
VFTQMPSIKSITLGSNVHCWKTHKQGQFHRQIGQAKPNDILTCDNAGMIL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccatggccacattgctgtgtctcttcttctctgtgcttggcctggctgtcatg
ggagcagtgaagaactgccatccgcagtgccgctgtgaggtggagagctttggcctcttc
gacagtttcagcctgaccaaagtggactgcagtgggatcgggcccgggaacgctcctatc
cccatccctctggacacctcccatctcgacctgtccttaaactccatcacatccatcagc
gattcgatgctctccggaccaggttacaccacattggtcagtctggacctaagcagcaat
gtcatagcacatgtcagtcccaaagcgttctctaaactccgttatctggagacgttggac
ttgagcaacaacgctcttgagggtcttggcgatggctgcttcactggactccctctcgtt
gagctggacctgagtgaaaaccaattcaaagagttcagccttgatctcttcaccaccaga
gcacaggatataccaatcatggtggacctgtcgcaaaacctcctgacctccattaacagg
aggacgcctggccatccgctgtacatcaagagtcttatgcttgcagggaacagattgaag
acggtcccaacgcttaacggaatcccacttcagtatctcaacctggacgggaacctcatc
tccagcattgacgcaggggcctttgattcgatgacagaactggttcacctgtctctcagc
ggcctgtctgtcctgaccttgattcaaccaggtgctttcaggggtttgaggaacctgcag
gtcttggacttatcaaacaacagccggctcaagacgttgagcccagatgtatttagcgga
ctcgtctctttacaagagcttcatttgtccaatactgctgtcacaccattatcaaggacc
gtctttacccagatgccaagcataaagagtataactctagggtcaaacgtgcattgctgg
aagacacacaagcaaggacagtttcacagacagattggacaggcaaaacccaatgatata
cttacctgtgacaatgcaggaatgatcttatga
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