Rhinichthys klamathensis goyatoka (western speckled dace): 130104554
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Entry
130104554 CDS
T09701
Symbol
slc6a4a
Name
(RefSeq) solute carrier family 6 member 4a
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130104554 (slc6a4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rkg02000
]
130104554 (slc6a4a)
Transporters [BR:
rkg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
130104554 (slc6a4a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
130104554
NCBI-ProteinID:
XP_056127140
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MEMKQPMMMNQEDGGKQEKEQESQENGRLVADSVAEKGPKSCSGSGQVSNGYPSTSPQSP
REGAGAGTDRGSTPGTFRTLVVQQTSLDPPRETWSKKMDFLLSVIGYAVDLGNVWRFPYI
CYQNGGGAFLLPYLLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGIGFAICII
ALYIAFYYNTIMAWALYYLLSSFRTTLPWTTCNNRWNTPNCTHYLSTDLNVSWTENSISP
AEEFYIRQVLQVHLSPGLHQLGWVSWQLALCLLFIFTVVYFSIWKGVKTSGKVVWVTATF
PYLVLLILLVRGATLPGAWRGVIFFLKPDWSKLLTTSVWLDAAAQIFFSLGPGFGVLLAF
ASYNPFHNNCYKDALITSSVNCLTSFLSGFVIFTVLGYMAEMRHQGVETVAKDAGPSLLF
IIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPHLLVKRREWFVL
GLVCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTTRFCNDVQL
MLGFAPGIFWRVCWVAICPCFLLFIIVSFLAFPPEVKLFDYLYPFWTTVLGYCIGVSSFI
CVPSYMVYYLITTKGTFKQRLLKSITPEASGSSGPQRDTIVITNAV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacaaccaatgatgatgaatcaagaggacgggggaaagcaggagaaagaa
caggagtcgcaagagaatggcaggctggttgcggacagcgttgcggagaagggtccgaaa
tcctgctccgggtctgggcaggtctccaacggttatcccagcacatccccacaaagtccc
agggaaggtgcaggtgctgggacggacaggggcagcacccctggaacattcaggactctg
gtggtccagcagaccagcctggatccacctagggaaacctggagcaaaaagatggacttc
ctgctgtcggtgatcgggtatgcagtggacctgggcaatgtgtggcgctttccctacatc
tgctaccaaaacggagggggtgcctttctcctgccgtacctgctgatggctgtctttggt
ggtgtgcctctgttctacatggaactggctttgggccagtttcaccgaagtgggtgtatc
tccatctggaaacacatttgccctatcttcaagggtataggctttgccatctgcattatt
gcactttacattgccttctactacaataccataatggcctgggctctctactacctcctg
tcctcctttcgcactacactgccctggaccacctgcaacaaccggtggaacactcccaac
tgcacccactacctgtccaccgacttgaatgtctcctggaccgaaaactccatctctcct
gctgaggagttctatatacggcaggtgttgcaggttcatctgtcacctggtcttcatcag
ctgggctgggtgagctggcagctagccctgtgtctgttgttcatcttcactgttgtctac
ttcagcatctggaagggggtcaagacatctggcaaggtagtgtgggtgacggctaccttt
ccatacctggtgttgctgatcctgttggtaagaggggccaccctaccaggagcatggaga
ggagtgatcttcttcctgaaacctgattggagcaaacttctaaccacttcagtttggctt
gatgcagctgcacagatcttcttctctctgggtccaggctttggtgttctcctggcgttt
gccagctacaatccttttcataacaactgctacaaagatgcattgatcacaagctcagtg
aactgtttgaccagtttcctgtcaggctttgtgatcttcacagtgctaggctacatggca
gagatgcgccaccaaggtgtggagactgtagctaaggatgctggtcccagtctgctcttc
atcatctatgctgaggctattgccaatatgcctgctgctacgttcttcgccatcatattc
ttcctcatgataattatgctggggctggatagcacgtttgctggtctggaaggtgtaatt
acagccatgttggacgagttcccccacctgttggtcaaaagaagagaatggtttgttctc
ggcctggtgtgtgtctgttatttgggcgccctctcgactctcacctacggaggtgcgttt
gttgttaaactatttgaggagtatgccacgggccctgctgtcatcaccgtagtcttcctc
gaggtcattgctgtttcctggttctatgggacgacacgtttctgcaacgacgtgcagctg
atgcttggctttgcccctggtattttctggagggtctgctgggtagccatctgtccctgc
ttcctattgttcattattgtgagtttcctggcattccctcccgaggtgaagctgtttgac
tacctctaccctttctggaccacagtgcttggctactgcattggagtctcctccttcatc
tgtgtgccttcctacatggtctactatctgatcaccaccaaaggaaccttcaaacagcgt
ctgctaaaaagcattacccctgaggcttcggggtccagcggccctcagagagacacaatt
gtcatcaccaatgccgtgtga
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