Rhinichthys klamathensis goyatoka (western speckled dace): 130104577
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Entry
130104577 CDS
T09701
Symbol
vtna
Name
(RefSeq) vitronectin a
KO
K06251
vitronectin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04510
Focal adhesion
rkg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130104577 (vtna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130104577 (vtna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130104577 (vtna)
00536 Glycosaminoglycan binding proteins [BR:
rkg00536
]
130104577 (vtna)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130104577 (vtna)
Glycosaminoglycan binding proteins [BR:
rkg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130104577 (vtna)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
130104577
NCBI-ProteinID:
XP_056127174
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MVSVLQSHSLDTRMRLLLLLGLLFFTYAAEQESCIERCENGFDATKNCQCDSMCTYYKSC
CTDYESLCRIRTRGDTFPSYPEDDYEETNTTEVPIRSRSQQRILTPSPATFADIFSLLTP
TSQVLDSTLNDDPSPVISTAATPTTHYPLLPSTIKTPTTTARTNSTADPTPTKARDPDTE
VCSGRPFDSFMQLKNSSTYAFRGEYFFELDEKSVLPGYPKLIEDIWGIKGPIDAAFTRIN
CQGKTYIFKGNKYWRFDDGVLDEDFPRDISVGFEKVPDHLDAAFAIPAHSHHGKEKVYFF
KGDQYYQYEFKHQPSHKECIQMSLRSPSALFSRYTDIYYDRWVEHFNQLFGGAQSHHGGH
HFINKDWIGIKSPVDAVLAGRLYVTPRWPNRRRQDRNRQDWDQQWGQRYGQQWGQRYGQQ
WGSRRRQNRSPYWETMAERGISIGHEYAQRFGQDRWQDQDRRRDYYHRQNDYDSDYRYKP
SEDIVHDMLHRRQPLQSVYFFKGDMYYRVNLRTKRVDYANPPYPRPIGKYWLGCKDTPGA
EKR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggtctcagttcttcagtcacattcactagacaccaggatgaggcttcttttgctgcta
ggactgcttttcttcacatatgcggctgagcaagagtcatgtattgagcgctgtgaaaat
gggtttgacgccaccaagaactgccagtgtgactctatgtgcacatactacaagagttgt
tgcacagactatgagtccttatgtcgtattaggacccgtggagacacctttccttcttac
cctgaggatgattacgaggagacaaataccacagaggtaccaatcagatccagatcacag
caaagaattttgaccccttctccagcaacctttgctgatatattcagcctattaacacca
acttctcaagtcttggattcgacgttaaatgatgacccatcaccagtgatttccactgct
gccactccaactacacattaccctctattaccctccaccatcaagaccccaacaacaact
gcacgaacaaactcaactgctgatcccacaccaacaaaagccagagaccctgacactgag
gtctgcagtggcagaccctttgactccttcatgcagctcaaaaacagctctacatatgca
ttcagaggagaatatttttttgagcttgatgagaaatcagtattaccggggtacccaaag
ctcattgaagacatctggggaataaaaggtccaatagatgctgccttcactcgcataaac
tgccaaggaaagacatacattttcaaaggtaataaatactggaggtttgatgatggagtg
ctagatgaagacttcccacgggacatatctgtgggatttgagaaggtaccagaccatctt
gatgctgcctttgccattcctgctcacagccatcatggcaaagagaaagtttattttttt
aaaggagaccagtattaccagtatgagttcaagcaccagccatcccataaggagtgcatt
cagatgtcattgagatctccctcagcactcttcagcagatacactgatatttactacgac
cgatgggttgagcacttcaaccagctctttggtggagcccaaagtcatcacggtggccat
cacttcatcaacaaagactggattgggatcaaatcacctgtggatgctgtgctagccggc
agactctacgtcactccgagatggcccaacagaaggcgccaggacagaaatcggcaggat
tgggaccagcagtggggccaacgctatgggcagcagtggggccaacgctatgggcagcag
tggggctccaggcgcaggcagaataggtcaccatactgggaaactatggctgagaggggc
atcagcattggacatgagtatgctcagaggtttgggcaggacaggtggcaagatcaggac
agacgcagagactattatcatagacaaaatgactacgattctgactacagatacaaacct
tcggaagacattgtccatgacatgctgcacaggcgtcagcccttacagagtgtctacttc
ttcaaaggagatatgtactacagagtgaatctccgaacgaagcgggttgactatgcaaac
cctccctacccaagacctattggaaaatactggcttggctgcaaagacacgccaggagca
gaaaagagatga
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