Rhinichthys klamathensis goyatoka (western speckled dace): 130104597
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Entry
130104597 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130104597
04121 Ubiquitin system [BR:
rkg04121
]
130104597
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130104597
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130104597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
DUF659
hAT-like_RNase-H
Rua1_C
Motif
Other DBs
NCBI-GeneID:
130104597
NCBI-ProteinID:
XP_056127201
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MSDAEIIYPPLSFKSKVWKHYGFYKKDGRLDKTNAICKLCRASVKYTGSTTNLISHLKRR
HGVVVEEASASAPASCSDSPVATSSKSGEKSIEGFFHAPLANNSARSTAITDAIALFICK
DIQPYSVTENEGFKHLLHVLEPRYKIPNRKLFSDKQIPALYDKVRREIEESLHKAQRVAL
TVDGWTSCATASYVTVTAHYIDDGWILKNHVLQTRVFNEAHTGNNLAVLLQDVCREWKIE
EKSPALVTDNARNMILAGAGAKMDPHVRCIAHTLNLASQKAFKVDSVSVLVVKVRKLVTF
FHKSPKATEVLREIQTQLHLPNHKLIHDVSTRWNSTLDMLERFWEQQPAVLNNLLSRKIK
RREAMASLTEDDMTLIPEIIKLMSPLKVATTLLSEEKNPTISIISPVQAKLQRQFQPDES
DLEVISHMKDRFRQDFDGRYTYLEGTLHCASALDPRFKDLAFLDDSDAKDMVFMKITTEV
VQMNGEEEVSDTAMPNEDQATGTLEEDQTAETEGDKSPSNEDKTDDAPPKKKTAMDQMFG
DFLSARTPAKTIREKAKDEILKYRERDTLGLDGDVLQWWRLQKDICKKDIKLSDINVDTR
ESRAEDRSAWQLVVRQGVQKAEEIRNKNLAVKSQEEGKATAASAGIVFHLQKTQQRLPF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgccgagataatttatcctccactgagttttaaatctaaagtttggaaacac
tatggattttacaagaaagacggacgacttgacaagacaaatgcaatttgtaaattgtgc
cgcgcatctgtaaaatacacgggcagtacgactaatctgatatctcacttgaagcggcgc
cacggtgttgttgtggaggaagcatctgccagtgcccctgcatcctgctctgattcacct
gtagctaccagctccaaaagtggtgagaaaagtattgaaggttttttccatgcaccgctt
gctaacaattccgcgcgctccacggcaataacagatgctattgcattgttcatctgcaaa
gatattcagccctatagtgtcacggagaacgaaggttttaaacacctcctccatgttttg
gagcctcgttataagataccaaaccgaaagctattctccgataaacagattcctgctctg
tacgacaaagtcagaagagagatagaggagtctttgcacaaagcccaaagagttgcttta
acagtggacggttggacatcttgcgctacagcatcatatgtaacggtcacagcacactac
atagatgacgggtggattctcaaaaaccacgttttgcagaccagagtgttcaacgaggct
cacacagggaataatctagccgttttacttcaggatgtttgccgcgagtggaagatcgaa
gagaagagccccgcgttagtcacagataacgccagaaacatgatcctggctggtgctggt
gccaaaatggacccacacgtgagatgcatcgcccacacattgaacttggcatctcaaaaa
gcctttaaggtggacagtgtctctgtgctggtggtgaaagttaggaagcttgtcaccttt
ttccacaaaagccccaaggcaactgaagttctgcgtgaaatacagacccagttacacctg
cccaaccacaagctcatccatgacgtttccaccagatggaacagtaccctcgacatgttg
gagcgtttctgggagcagcagcctgctgtgctgaacaacctgctatccaggaagataaag
aggcgtgaggctatggccagtttgacagaagatgacatgacactgatcccagagatcatc
aaattaatgtcaccactgaaagtggcaaccacactcctcagtgaggaaaaaaatcccacc
atctccattatctctccagtccaagccaaattgcagagacaattccaaccagatgagagt
gatctagaggttatttcccatatgaaagacagattcaggcaggactttgatggccgttat
acatatcttgaaggcactctccactgtgcctcagcacttgacccccgttttaaagacctg
gcttttctggatgacagtgatgccaaggatatggtattcatgaagataacaacagaggtg
gtacagatgaatggagaggaagaggtcagtgacacagcaatgccgaatgaagaccaggca
acaggcacattggaagaggaccagacagctgaaacagaaggcgacaaaagcccttccaac
gaggacaagacagatgatgcccctccaaagaaaaagactgccatggaccagatgtttgga
gatttcctgagtgcaagaacaccagcaaagaccatcagggagaaagctaaggatgaaatc
ttaaaatatagagaaagggacactttaggtttggatggggatgtgttgcagtggtggaga
ctgcaaaaagatatctgcaagaaagacatcaagctgtctgacatcaacgtggacacgagg
gagagtcgggcagaagaccgctccgcctggcagcttgttgtcagacagggcgtacagaaa
gcagaggaaatcagaaataaaaaccttgccgtaaagagtcaagaggaaggaaaagcaact
gcagcctcagcaggcatcgtttttcacctgcagaaaacgcagcagagattgccattctag
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