Rhinichthys klamathensis goyatoka (western speckled dace): 130105399
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Entry
130105399 CDS
T09701
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
130105399 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130105399 (xrcc5)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
130105399 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
VWA_2
VWA
SusD-like_2
Motif
Other DBs
NCBI-GeneID:
130105399
NCBI-ProteinID:
XP_056127363
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MARAAKSALVLCMDVGFSMSNSEPGHEPPFEQAKKVIQKFVQRQVFAENKDEVALVLFGT
DGTKNPLAKDGQYENITVHRHLMMPDFELLQEIESELQPGGQQADWLDALVVCMDLLQNE
TMGKKNDRLNIVLLTDLNIQTSADQLDVIIKNLKKAGITMQFFLPFPVDDEDRGDGDGDG
PGPSAAPPRPGKGLNKQQKQGLEMVKNIMTSLEEEDGLEEVYTFSDALEKLSIFKRINRR
PMAWPCQMTIGSALTIRIVGYKAVTEEKVKKSWAVVDAQSHQREDVKRESVYCLNDDDET
EVQKDDTIQGFRYGSDIVPFSKVDEEQMKYKHDGKCFAVLGFTKQEAIRRHQFMGSQVVK
VFAPRDDEHAAVALSALIHALDGLKMAAIVRYAYDRRSNPQVGAAFPCIKEKYE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagcggcgaagtcagcgttggtgctgtgcatggatgtgggtttctccatgagc
aactctgagccgggtcatgaaccaccctttgaacaagccaaaaaagtcatccagaagttc
gtccagcggcaggtgtttgctgagaataaagacgaggtggctctggtgctgtttggtact
gatggcactaagaaccctctggccaaagacgggcagtacgagaacatcacggtccaccgg
cacctcatgatgcctgactttgagctgctccaagagatcgagagtgaacttcagcctggt
ggtcagcaagcagactggcttgatgctcttgtggtttgcatggaccttctgcagaatgaa
accatggggaagaaaaacgatcgtctgaacatcgtcctgctgacggatctgaatatacag
acctcggcggaccagctggacgtcatcatcaaaaacttgaagaaagctggtatcaccatg
cagttctttttgccgttccctgtggatgatgaggaccgaggggatggtgacggggacgga
ccgggaccgtcagcggctccaccccgtcctggaaaaggcttgaacaaacagcagaaacaa
ggactggagatggtcaaaaacatcatgaccagcctagaggaggaggacggcctggaggag
gtctacacctttagtgatgctctggagaagctgtccatcttcaagcgcatcaacaggagg
ccgatggcgtggccctgtcagatgaccatcggcagcgcgctgaccatccgcatcgttgga
tacaaagctgtgacggaggagaaggtgaagaagtcctgggccgttgtggacgctcagagt
caccagcgggaggacgtcaagagggaatcggtttactgcctgaacgatgacgatgaaact
gaagtacagaaggatgacactatccaaggtttccgttatggaagtgacatcgttccgttt
tcaaaggtggacgaggagcagatgaaatataagcatgatgggaagtgttttgctgtgctt
ggcttcactaaacaggaggcgattcgtcgtcatcagtttatgggaagccaagttgtcaaa
gtttttgctcccagagatgatgagcatgcggcagtggctctgtccgctctgattcatgcc
cttgacggtctaaagatggcagcgattgtgcgttatgcttacgatcgccgcagcaatcct
caagtgggcgccgcctttccctgcatcaaggagaaatatgaa
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