Rhinichthys klamathensis goyatoka (western speckled dace): 130105580
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Entry
130105580 CDS
T09701
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130105580
Ion channels [BR:
rkg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
130105580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
130105580
NCBI-ProteinID:
XP_056127610
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MDRNELSPGSDVAMTKKAAHKSAPPYHCAGKSTAKSCLESNSDAASGSNPKPNHVATEET
EDGEEESKFQHPRLRRAGGGGSAQQIRGGGGGGGRGGGASRSSTSTDARPGDAASAAGRH
DTVKGGGGGGKASTVVATVTVEPCNAAEGDGNPSAPLSSMKCNKNGECRRDSGTGSLRSI
MSKTDGFKRTACNSTTSVDGTSTQGQDASNNPGFPEKKDSKVSFSNTPSRKASSSIHGAQ
QPRNSVTFLKSEDGGQEDTETRDSRDSQTSFMQRQFSSMLQPGVNKFSLRMYGSQKAVEK
EQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKEETTTPWIIFNVIS
DTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKKYLKTWFVVDFVSSIPVDYIFLIVEQG
IDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRIINLI
AMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMVNDTWSELYSFAVFKAMSHMLCIGYG
RQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHK
LPSDFRQKIHDYYEHRYQGKMFDEESILEELNEPLREEIVNFNCRKLVASMPLFANAEPN
FVTAMLTKLRFEVFQPVDYIIREGTIGKKMYFIQHGVVTVITKGTVGLKLSDGSYFGEIC
LLTRGRRTASVRAETYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRLGKKNSILM
NKVQHDLNSGILNNHENEMIQEIVKYDREMVKLIDQQRPRAMSMTPSIPPGMFAPPGHPQ
GSSAIASLQQAVAMSFCPQFGGPMVGPSTLQSPRMVRRFQVVQSLASPVSASPQQSLPPL
GAFAAVAMASPPVQSPLAAAGGRTFQYGSGPMGARSGSQLSLIQQHAPSPTRPKGSQPSH
QTGSLTQDDRALSASQPSLPQDGAPPVVPSPPPSTRVSSTSIGPPHPAIPGPSGVRSALH
QRMALPHQASAAVSGIYPSTAPPTGTPPVTGPDSAIRKKDSIVSLPETDFTARSRLSSNL
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggaccggaatgagctctcgcccggttcggatgttgccatgacgaagaaagcggcccat
aagagcgcgcctccgtatcactgcgccgggaaaagcaccgctaagagttgcctggagtcc
aactcggatgccgcctccggctcgaacccgaaacccaatcacgtcgccacggaggagacg
gaagatggggaggaggaatccaagtttcagcatccgagactgaggagagcaggtggagga
gggagcgcgcagcagattagaggaggaggaggaggaggaggaagaggaggaggcgcgtct
aggagctccacttccactgatgcgcgcccgggtgatgctgcttctgctgcggggcgccac
gacaccgttaagggcggaggaggaggaggcaaagcgtctaccgtagtggccaccgtgacg
gtagagccttgtaatgctgccgaaggcgacggcaatccctcagcaccgctttccagcatg
aaatgcaacaagaacggggagtgcaggcgggactccggcaccgggagcctccggtccatc
atgtccaagacggacgggtttaagcggacagcgtgcaattcaacgaccagcgttgacgga
accagcacgcaggggcaggacgcctcgaacaaccccggcttcccggagaagaaggattcc
aaagtgtccttttccaacactcccagcaggaaagcctcgtcgtcgatccacggcgcacag
cagccccggaactcggtgacgttcctcaaatccgaggatggcggtcaggaggacaccgag
acccgggacagccgggacagccagacgagcttcatgcagaggcagttcagtagcatgttg
cagcccggggtcaataaattctccctgcgcatgtacgggagccagaaggcggtggagaag
gagcaggagcgcgtgaaatcggcgggaaactggatcattcacccctacagcgacttcagg
ttctactgggatttcaccatgcttctcttcatggtgggcaacctgatcattattcctgtg
ggcatcaccttcttcaaagaagagaccaccactccgtggatcatcttcaacgtgatctcc
gacaccttcttcctcatggacctggtgctcaacttccgcacgggcatcatcatcgaggac
aattccgacattatcctggaccccaagaccatcaagaagaagtacctgaagacctggttt
gtggtggactttgtctcttccattccggtggattatatcttcctgattgtggagcagggc
atagactcagaggtgtacaagacggcgcgagccctgaggattgtgcgtttcactaagatc
ctgagcttgctgaggctgctgcgtctctctcggctgatccgctacattcaccagtgggaa
gagatcttccacatgacgtatgacctggcgagcgcagtgatgcgcatcattaacctgata
gcgatgatgttgttgctgtgccactgggacgggtgcctgcagtttctggtgccaatgctg
caagacttcccatcagactgctgggtctccctcaacaagatggtgaatgacacgtggagt
gagctgtactcgtttgctgtgtttaaagccatgagtcacatgttgtgtattggttatggt
cgtcaagctccggagagtctctctgatatctggctgacgatgctcagcatgattgttggt
gccacctgctatgccgtcttcatcggacacgccacggccctcatccaatcactggactcc
tcacgacgccagtaccaggaaaagtacaagcaagtggagcagtacatgtccttccacaaa
ctcccgtcagatttccgacagaaaatccacgattactatgagcaccgttaccagggcaag
atgtttgatgaagagagcatcctagaggaactgaacgagccgctcagagaggaaatcgtg
aacttcaactgccgtaagctggtggcctctatgcccctgttcgccaacgccgaacccaac
ttcgtgacagccatgctgacgaagctccgtttcgaggtcttccaaccggtcgattacatc
atccgtgagggaaccatcggcaagaagatgtacttcattcaacacggcgtcgtgacagtg
ataaccaaaggaactgtggggctgaaactttctgacggctcctacttcggagagatctgt
ctgctgacgcggggtcggcgtacggcaagcgtgcgagcggagacctactgtcgcctgtat
tctctctccgtggacaattttaatgaggtattggaggagtatcccatgatgaggagggcc
tttgagaccgtggccatcgaccgactggaccgcttaggaaaaaagaattccatcctaatg
aacaaagtgcagcacgacttaaactccggcatcttaaacaaccatgagaacgagatgatc
caagagatcgtgaagtacgaccgagagatggtgaagctgatcgatcagcagcgcccgcgt
gccatgtccatgacgccctccatcccgccagggatgtttgctccgcctggccatccacag
ggcagctctgccatcgcctctcttcagcaagctgtagcgatgagcttctgtccgcagttc
ggtggccctatggtgggtccgagcaccttgcagtcgcccaggatggtccgacggttccag
gttgtgcaaagccttgccagcccggtttcggcttctcctcaacagtctctcccgccgctt
ggcgcgttcgctgccgttgcgatggccagtccgccggtgcagagtccgctagcagcggca
ggcgggcgaactttccagtacgggagtggcccgatgggtgcgcgctccggatctcaattg
tccctcatccaacagcatgctcccagtcccacacggcccaaaggatcccaaccgtcgcac
caaacaggcagcttgacccaggatgatagagccctgtctgcttcacaaccctccctgcca
caagatggcgccccacccgtcgtgcccagcccgccaccgtcgacccgcgtgtcctcaaca
tcgatcggcccacctcatcccgccatcccggggccttccggtgtccggagcgcattgcat
cagagaatggcactgccacaccaggcgtcagcagccgtgtctgggatttacccgtccaca
gcgcctcctacaggcactccccccgtaacgggaccggactcggctatacgcaagaaagat
tccatagtcagccttcccgagacggacttcacagccagatcccggctctcgtccaacctc
tga
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