Rhinichthys klamathensis goyatoka (western speckled dace): 130106321
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Entry
130106321 CDS
T09701
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130106321 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130106321 (nup85)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130106321 (nup85)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130106321 (nup85)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130106321 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
P2_Phage_GpR
Motif
Other DBs
NCBI-GeneID:
130106321
NCBI-ProteinID:
XP_056128369
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MMEEVDVEPSPTLIPGAGFHQRHLGFEWGPGDLLVYETNYKLQGPKSASSPFVHIVRKDE
DICSPILRKLFNESHLIFVGLQKIKEDVPSKNKKTQFVSISKNYRSVIRACMEELQQNAV
SAQEGSSASQYGDQVSILLAIELIWNLCEVLFIDASPAGSLLLHLLDWVRLHKSDVDSRA
REVLQSESPTRHQAYWDVVISLVLQGRMDEARQVLYKQASLRGESSAVFRRMDVLLQNMP
VFNPTGSQTLTEFDMKWRNWHEECDRSLQDNTFASNRHLETICKILVGDEDALLEQKELL
GTWYHFLVTRLLFTHPSIKPPDLHYYAQSSMNMFQGPRASPEPLDIILLSAFEFDLHQVI
KDCSIALNNWWFVAHLTDLLDHCKLLQSHNLDFGSNLREFLVLEYASGLFTHHSLWQLAV
DYFDHCPEFGRVYLELQIERVPLDSERKAIKVLRICEDRQMSEQVRSICKIMAKRALRNN
RLGSALSWSIRAKDAAFATLISERFLQDYSNKGSFTDLDLLDNLGPAMLLSDRLTFLGKY
REFHRLYGEHRFSEAARLLLSLMTAKIAPRSLWMTLLTDALPLLEQKEVIFSVDQTYELM
SCLEELNSGTKEPKQGDQDEDIESTKMELLRLSLARNLAMAIVKEGTIET
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggtggacgtggagcccagtcccacgttgattcccggcgctggatttcat
cagagacacttgggttttgaatggggtcctggagatctgttagtctatgagacaaactac
aaactacaaggtccgaagtctgcgagctctccgttcgtccacatcgtgaggaaagatgaa
gatatctgctcccccatcctgcgtaagctcttcaacgagtcccatctcatcttcgtgggc
ctgcagaaaatcaaagaggacgtcccgagcaaaaacaagaagacgcagttcgtgagcatc
agtaagaactacaggtctgtgatcagagcctgtatggaggagcttcagcagaacgcagtt
tcagcacaagaggggtcttcagcgtcccagtatggagatcaggtgtcgatcctcctggcc
atcgagctgatctggaacctgtgtgaggtgctgttcatcgatgcttctccagccgggtct
ctgctgctgcacctgctggactgggtgcgcctccacaagtcggacgtggactccagagcg
agggaagtgttgcagagtgagagccccacccgacatcaggcctactgggacgtggtgatc
agtctagtgctgcagggccggatggacgaggcgcggcaggtcctgtacaagcaggcgtct
ctgcggggcgagagcagtgctgtgttcagacgcatggacgtcctgctgcagaacatgccc
gtgtttaaccccacaggaagtcaaacgctgaccgagtttgatatgaaatggaggaactgg
cacgaggagtgtgaccgcagtctccaggacaacaccttcgccagcaaccgtcacctggag
accatctgcaagatcctggtgggcgatgaagacgctctgctggagcagaaggagctgctg
ggcacctggtatcacttcctggtgacgcggctgctgttcacacacccctccatcaagccg
cccgacctgcactactacgctcagtcgagcatgaacatgtttcagggtccgcgtgcgtct
cccgagcctctggacatcatcctgctgtcggcgtttgagttcgacctgcatcaggtgatc
aaagactgcagcatcgcgctcaacaactggtggtttgtggctcatctgacggacctgctg
gatcactgcaaactgctgcagtcacacaacctcgatttcggctctaatctgcgtgagttt
ctggttttggagtacgcctcgggtctcttcactcatcacagtctgtggcagctggcggtg
gattatttcgatcactgtcctgagttcggtcgtgtgtatctggagctgcagatcgagaga
gtcccgctcgactccgaacgcaaagccattaaagtcctgcgtatctgtgaggaccggcag
atgagtgaacaggtgcgcagtatctgtaagatcatggctaaacgagctctgaggaacaac
aggctgggatctgctctatcctggagcatcagagctaaagacgctgccttcgccacactc
atctctgagaggtttcttcaggattacagtaataaaggctctttcacagatctggatttg
ttggataatctgggtcctgccatgctgctcagcgacagactgacgtttctaggaaagtac
cgtgagtttcacaggctctacggtgagcatcgcttctctgaggcggccagactcctgctg
tccctcatgacggctaagatcgccccgcgcagcctgtggatgaccctgctgaccgacgca
ctgcctctgctggagcagaaagaggtgatcttctccgtggatcagacgtatgagctcatg
tcctgtctggaggaactgaactcaggaaccaaagagccaaagcagggagaccaggatgaa
gatatcgagtccacaaagatggagctcttgcgactgtctctggcccgtaacctcgccatg
gccatcgtgaaagagggaacgatagaaacataa
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