Rhinichthys klamathensis goyatoka (western speckled dace): 130106329
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Entry
130106329 CDS
T09701
Symbol
si:ch211-106h11.1
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130106329 (si:ch211-106h11.1)
Ion channels [BR:
rkg04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
130106329 (si:ch211-106h11.1)
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Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_R13L1-DRL21
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
130106329
NCBI-ProteinID:
XP_056128378
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All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MFTLSELWSGGERQGSYKLLKPWWEVFMDYLLVLMLMVSILAGTLLLSRDGVVCVPVHSF
STNYSSTMEPMSDFVYTGAKQSLGSPAKGRRTNLDFQQYVYISQVCYHEALPWFSRFLPY
VTLLHTLVLLASGCFWFHFPLTSARIEHFLSLLAKCCESPWTTRALSHTAKLDTRFSEAE
QVMRPKVQVTSSYKMRKSSLDSGTDSPLLAGTDSASTTTQPSPCPSTLSHCSTLSARSLK
EPLLPAQVVPDGSRPGATLDRSDREQARALFERVRRFRAHCESSDVIYKVYTAQTVFKVL
KFVLIVSYTTPLLSSISFSHVCQLHSHALTGYSLFQCSHSLSSVLRKLMQAYISLLFLFG
LLGVYALFWIFHKSLRQYSFQSLREKGSMLDAPDLHNDLAFLLHMADQYDPLLSQRLSVF
LSPVSETRLLEESLERRWGAERLRSMITSDTQGRSLLQLVALPRLPPALFTLSQLQVLKL
ELIGDAKLTAQISNMTALRELHLYHCTASVEPAALQHLQEHLETLHLTFTHASEIPAWVY
SLRGLQELHLSGRLSSEGGMGRGWALMSLRQLRHLRVLVLRGALQTIPGELSDLAGSLVK
LEIYNEGTRLLVLTGLRRLTGLAEVQLNGCQLERLPSALLALTGLRILDLQHNSLRTLEE
LLGLQHLRRLSGLRLACNQVLALPATVGVLRSLELLDLAQNQLRNLPSALFTLRRLRRLL
LAGNLLEVLPAEVGALTLLSELDLSANRLERLPKELFGSCVELRSLNVANNSLGSLPAGL
GGLTQLSRLDVRGNSLEELPVELGSCFGLRGGGFLAENWLMHTLPPQVRDVLQQTGSSEP
PSRPNSDCFPNFSTAQWSFHSALESRI
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgttcactctgtctgagctgtggtcgggcggcgagcgtcagggcagttataagcttctg
aagccgtggtgggaagtcttcatggactacttgctggtgctaatgctaatggtgtctatc
ctcgccgggactcttctgctgtcccgggacggagtcgtgtgcgtccccgttcactccttc
tccaccaactacagctctactatggagcccatgtctgatttcgtttacacaggtgccaaa
cagtctctcgggagtccagcaaaggggcgacgtaccaacttggacttccagcagtacgtc
tacatcagccaggtttgctatcacgaggcgctgccctggttctcgcgctttctaccgtac
gtgacgctgctccacacgctggttctgctggctagcggctgcttctggttccacttcccg
ctcacgtccgctcgtatcgagcacttcctgtcgctcctcgccaaatgttgcgaatcaccc
tggacgacaagagcgctttcgcacacggccaaactggacactcgcttttcggaggcggag
caagtaatgcgacccaaagttcaggtaacatcttcgtacaaaatgcgcaagtcgagtttg
gactcgggaacggacagccctctgctggcgggaactgatagtgcatccactacgacacaa
ccctctccatgtccctccactttatcccactgctccacgctctccgctcggtcgctcaag
gagccgcttctgccggcgcaagtcgtcccggacgggtccagaccgggagccacattggac
cgcagcgacagggagcaggccagagcgctgttcgagagagtgcgcaggtttcgcgctcac
tgcgagagttcagatgttatctataaggtgtacactgctcagacggtgttcaaggtcctg
aagttcgtcctgatcgtgagctacactactcctctcctgagctccatctctttcagtcac
gtctgccagcttcactctcacgctctgaccggctacagcctcttccagtgcagtcactcg
ctgtcctccgtcctgcgcaagctgatgcaggcctacatctcgctgctgtttctgtttggc
ctgctgggcgtctacgccctcttctggatctttcacaagtctttgaggcagtactctttc
cagagtctacgtgagaaaggatccatgctagacgcacctgaccttcacaatgacctggcg
ttcctcttgcacatggccgaccagtacgaccctctgctgtcccagcgcctgtctgtgttc
ctgtcgccggtcagcgagactcgcctgctggaggagagcctggagcggcgctggggagcc
gaacgcttgcggtcgatgatcacgagtgacacgcagggccgatctctgctgcagctcgtg
gctcttcctcgcctgccgccggccctcttcaccctcagccagttacaggtgttgaagctg
gagctgattggagacgccaaactcacagcacagatatctaacatgaccgcactcagggag
ctgcacctctaccactgcactgcctcagtggagcccgcagccctgcaacaccttcaggaa
cacctggagaccctgcacctcaccttcacccacgcctccgagatcccggcctgggtctac
tccctccgcggcctgcaggagctgcacctgagcgggaggttgagcagcgagggcgggatg
gggcgcggctgggccctcatgagcctccgacagctgcggcacctgcgcgtcctggtgctg
cgcggcgcgctccagacaatcccgggggagctcagtgatttagccgggagtctggtaaaa
ctggagatatacaatgagggcactaggttgttggtgcttacgggactgaggcgcttaacc
ggattagcagaggtgcagctgaacggatgccagttggaaagattgccatcagcgctgcta
gcgctcacaggtctacgtattttagacctgcaacacaatagcctgcgtaccttagaggag
ctgttgggattgcagcatctgcgccgtttgtccggtctacgacttgcttgtaatcaggtc
ttggctcttccggctactgtaggagtgctgcgctcgctagagctcttggatttagcgcaa
aatcagctgcgaaacttaccgtcggctctcttcacactacgcagactgcgacgcctcctg
ctggccgggaatcttctggaagtgcttccggcggaggtcggcgctctgacgctgcttagc
gaactggacctcagcgctaaccgactcgaacgccttcccaaagagctgtttggaagctgc
gtagaacttcgcagcttgaacgttgcgaataactcgctgggatctttgccggcgggtctg
ggcggcttgactcagctgtcccgtctggatgtgcggggaaacagtctggaggagcttccc
gtcgagctggggagctgttttgggctccgtggaggcgggtttcttgcggaaaactggctg
atgcacaccttacctccgcaggtcagggacgtcctgcagcagaccggctcttctgaacct
ccgtcacgacccaattcggattgttttcctaacttttcgactgcgcagtggagctttcac
tccgcactggaatctcggatataa
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