KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130106339
Entry
130106339         CDS       T09701                                 
Symbol
chmp6a
Name
(RefSeq) charged multivesicular body protein 6 isoform X1
  KO
K12195  charged multivesicular body protein 6
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03250  Viral life cycle - HIV-1
rkg04144  Endocytosis
rkg04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    130106339 (chmp6a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130106339 (chmp6a)
  09143 Cell growth and death
   04217 Necroptosis
    130106339 (chmp6a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rkg04131]
    130106339 (chmp6a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rkg04147]
    130106339 (chmp6a)
Membrane trafficking [BR:rkg04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    130106339 (chmp6a)
Exosome [BR:rkg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130106339 (chmp6a)
  Exosomal proteins of other body fluids (saliva and urine)
   130106339 (chmp6a)
SSDB
Motif
Pfam: Snf7
Other DBs
NCBI-GeneID: 130106339
NCBI-ProteinID: XP_056128392
LinkDB
Position
Unknown
AA seq 200 aa
MGNVFGRQRHLSRVTEQDRAILQLKQQRDKLKQYQKKITLQLEKERRLAKLLLKDGKKER
ALLLLKKKRYQDLLLDKTEIQIANLERVVQDIEFAQIEVKVIEGLKAGNDCLKQIHEVMS
IEEVERILEETQEAIEYQKQIDELLAGWLTPEDEDAVLAELEAITQGEDITLPELPTDPL
PAVPTGETERKEPEREMLAA
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggtaatgttttcggcagacagagacacctcagtcgagtgacagagcaggacagggcg
atattgcagctgaaacagcagagagataaactgaaacaataccagaagaaaatcacatta
cagctggagaaagagagacgtctggccaaactgctcctgaaggatggcaagaaagagcga
gctcttctgctgctcaaaaagaaacgctaccaagatctcctgctggacaagaccgagatc
cagatagccaacctggagcgcgtggttcaagatattgaatttgctcagattgaagtaaag
gtcatcgagggtttaaaagctgggaatgactgtcttaagcaaattcatgaggtcatgtca
attgaggaggtggagagaatactggaggagacgcaggaggccattgagtatcagaagcaa
attgatgaactgctggcgggttggttgacaccggaggatgaggatgctgtgttagccgag
ctggaggccatcactcagggagaagacataacccttccagaattacccacagatccattg
ccagcggtgcctacgggagagacagagagaaaagagccggagcgagagatgctggcagcg
taa

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