Rhinichthys klamathensis goyatoka (western speckled dace): 130106356
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Entry
130106356 CDS
T09701
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130106356 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130106356 (polr1b)
Enzymes [BR:
rkg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130106356 (polr1b)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
130106356 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
130106356
NCBI-ProteinID:
XP_056128411
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MDLSKWCNLKSEPSLKNLTEAGFGVPKDKQHVPVQELVKAHIESFDQAVTDGLCRVVEAI
PPLEFLYKGNRVSLSFVEAIIHTPAVPKGGISRDLRMFPAECRGRRCTYRGKLVADVSWS
VDGVPKGIIKQSLGQVPIMVKSKLCNLHGLSPKELIKHHEEAEEMGGYFVVNGIEKVIRL
LIMPRRNYPIAISRPKFKSRGQGYTQYGISMHCVKDEHTAINMNLHYLENGTVMVNFIYQ
KELFFLPLGFALKALVEFSDYQIYQELIKGREENSFFKSCISEILRMVMDQGCTTKAKVL
SYLGERFRVKLDLPEWFTHEQCAQFLLDECLCIHLKSNVEKFYVLCMMTRKLFSFAKQEC
MEENPDSLMFQEVLTPGQLYLMFMKEKMAGWLVSFKRVLEKKSERLGELTTNGLTKIFNM
ATDLTSAFEYMLATGNLQSKTGLGMLQNSGLCVVADKLNYIRYLSHFRCVHRGAAFAKMR
TTSVRKLLPESWGFLCPVHTPDGEPCGLMNHLTAQCEIVAQVYPTTTLPALLCSLGVTAV
DGSPSQPYSDCYPVILDGAMIGWVEKEVAPSVIESLRRFKVLREKKVPPWTEIVLVPQTG
KASLYPGLHLFTTPCRMVRPVRNLGLGKQELIGTFEQVYLNVGIFEEELEEGVTTHQELF
PHSMLSVVAEFIPYSDHNQSPRNMYQCQMSKQTMGFPLHAYQERSDNKLYRLQTPQSPLV
RPAMYDHYNMDNYPIGTNAIVAVISYSGYDMEDAMIVNKSSWERGFAHGFIYKTDVIDLN
KKVKGEDSIVFGVKPGDTALLGKLDADGLPFIGSVLKYGDPYYSYINLNTGQSRVIFFKY
QESSIVDNIKVCSNDTGTGRFKYICITNRIPRNPTIGDKFASRHGQKGILSRLWPAEDMP
FTESGMSPDILFNPHGFPSRMTIGMLIESMAGKSASLHGLSHDATPFKFSEESSALEHFG
EMLKAAGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTN
QPLGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAQVCIDCGSLLSPLLEK
PPPHWSTTRHRETYCLLCNKSDSIETVSVPYVFRYFLAELAAMNIKVKLEVK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatctctccaagtggtgtaatctaaagtccgaaccgagtttaaagaatttgacagag
gcagggttcggagtcccgaaagacaaacagcacgttcccgtgcaggagctcgtgaaggcg
cacattgagtcatttgatcaggcagttactgatggattatgtcgggttgtggaggccatt
cctcctttggagttcttgtacaagggaaacagagtcagcctgtcttttgtggaggccatc
attcacacgccagcggttcctaaaggaggaatcagtcgagatctgcggatgttccctgcc
gagtgcagaggcaggcgctgtacatacagggggaagctagtggctgacgtgagctggtct
gttgatggcgttcccaaaggaatcatcaaacagtctttgggacaggtgccgatcatggtc
aaatcgaaactctgcaaccttcacggtctctcacccaaagaactcataaagcatcacgaa
gaagctgaggaaatgggtggttattttgtggtgaatggcatagagaaggtgattcgtctt
ttgatcatgccgaggaggaactatcccatcgctatatcaagaccaaagtttaagagcaga
ggacagggctacactcagtacggtatttcaatgcactgtgtaaaggacgaacacacagcc
attaatatgaatctacactacctggaaaatggaacagtgatggtgaatttcatttaccag
aaagagctgttctttcttcccttgggctttgcgctgaaggctctagtggagttctcagat
taccagatctaccaggagctgattaaaggtcgagaggagaactctttctttaagagctgt
atctccgaaattctgcgtatggtcatggaccagggctgcacaactaaagccaaggtgctc
agttacctaggcgagcgtttccgggtcaaactcgacctcccagagtggttcactcacgag
cagtgtgctcagttcctgttagatgaatgtctgtgtattcacctaaagtcaaatgtggag
aagttctacgtgttgtgcatgatgacacggaagctcttcagctttgccaaacaggagtgt
atggaggagaaccctgacagtctgatgttccaggaagttctcacaccaggccagctctac
ctcatgttcatgaaagagaaaatggcaggctggctggtgtcgtttaaacgggtcttggaa
aagaaaagtgaaagactgggagagctgaccacaaatggtttaaccaaaatcttcaacatg
gctacagatctcaccagtgccttcgagtatatgttagccacaggaaacctccagtccaag
acaggtctgggcatgctgcagaacagcggactgtgtgtcgtggcggataagctgaactac
atccgttacctgtctcattttcgctgtgtgcatagaggagccgccttcgctaagatgagg
accacgagtgtgcggaagctgctgccagagtcttggggtttcctgtgtccggtacacact
cctgacggagaaccgtgcggcctcatgaaccacctgacagcccaatgtgagattgtggca
caggtgtatcccacaaccaccctgcctgccctgctctgctctctgggtgtgactgctgta
gatggtagccccagtcagccttattcagactgttatcctgtcatactggacggggccatg
attggctgggttgaaaaagaagtggcgccctccgtcatcgaatctctccgcagatttaag
gtgctgagagagaaaaaagtgccaccctggactgagattgttctggttcctcagacgggt
aaagccagtttgtacccaggcctccatctgttcaccacaccctgtcgcatggtgcggcct
gtccgaaaccttggcctgggcaaacaggagcttattggcacttttgaacaggtgtacctg
aatgtgggcatctttgaggaagagttagaggagggagtgaccacacatcaagagctgttt
cctcacagcatgttgagcgtggttgcagaattcatcccttactctgatcacaaccagagc
cccagaaacatgtaccagtgccagatgagtaaacagaccatgggcttcccactgcatgcg
taccaggaacgatccgacaataaactgtaccgtctccagaccccccagagtcctctggtc
agacccgcgatgtacgaccactacaacatggacaattaccctattggcacaaacgcaata
gtggctgtcatttcttactctggctacgatatggaagatgctatgatcgtcaataagtcc
tcatgggagcgtggctttgctcatggttttatttataagaccgatgtcatagatctgaac
aaaaaggtcaaaggtgaagacagcattgtgtttggggtaaagccaggggacaccgcatta
ctgggcaaactggatgcagatggattgccatttattggctccgtgctgaagtatggagac
ccttactacagctacatcaatctcaataccggccagagtcgtgttatctttttcaagtac
caggagagcagcatagtggacaatatcaaggtgtgcagcaatgacaccggcactggccgt
ttcaagtacatttgcatcacaaaccgcattcccaggaaccccaccattggtgataagttc
gccagcagacacggtcagaaaggaatcttgagccgcctgtggcccgcggaggacatgccc
ttcaccgagagcggcatgagcccggacatcctgttcaaccctcatggcttcccctccaga
atgaccatcgggatgctcatcgagagcatggctggaaaatctgcgtctctccatggcctg
tctcacgacgccacacccttcaagttctcagaggaaagctctgcgttggagcactttggc
gagatgctgaaagccgcgggatacaacttctacggaacagagcggctctactccggcatc
agcggcttggagctcgaggcagacatcttcatcggggtggtttactaccagcgcttgcgt
cacatggtctctgacaagttccaggtgagaactacgggagcgagagataaagtgaccaat
cagccgctgggagggaggaacgtgcagggaggaatccggttcggagagatggaacgggat
gctttgctggctcacgggacgtcgtttctgcttcacgaccggctgtttaactgctcagat
cgctccgtggcgcaagtttgcatagattgcggcagcctgctgtcgccgcttctggaaaaa
ccccctcctcattggtcaactacacggcatcgggaaacatactgcttgttgtgcaataag
agcgactctattgagactgtgtccgttccttatgtgttcagatacttcttagcagagctt
gcagcaatgaacattaaagtcaaattagaagtcaagtaa
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integrated database retrieval system
