Rhinichthys klamathensis goyatoka (western speckled dace): 130106358
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Entry
130106358 CDS
T09701
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130106358 (hps1)
Membrane trafficking [BR:
rkg04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
130106358 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
130106358
NCBI-ProteinID:
XP_056128415
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MKCLLVANESAEVLFYWTDNEFEQRIQAQYVVSQEEGERLPAFEDSINTLFAPIIISCST
MVDRLGDNYTSFNTENNHIYVLHQFEECLYIAVNGDGDETEEDLKRKIYVMKKLTEIMFG
MVTLSGALLRKELRPQETEQRNRLWKKLQSLLETYSRLREHDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQINSNVDRAGEEVLHAFILVHTKLLAFYSSRNASSLNPSDLLALIILV
QDLYPSKIDQDDTPEELESSSVPDVFYTPEPSPPERESVVRPRGDSPPIFQFVDADVQMA
EDSLKTLEVPTPDPSAPFRVFLEAKECPMMPHSMYCLSLWPGITLVLLTKIPNSHMAISI
YYFLEAFVKLEKRLCEGHEGSAATRGQPSVQEQRGRLEKLVKVWASMDIQTSHLQNVWTD
FKSKAFTRSGSGFTRDLLPSCRNMKTQLCSVYRQFFAAECMGSSQRLAPHLQERALNMVQ
EKLMDWKDFLLVKSKRNITMVSYLEEFPGLVHFIYVDRSSGQMIAPSLNVTDRTVSELGK
GPLADFIKNKVWSLVATTRRYLHKGYATVTLRDGDYFYCYFLWFENETGYKLEVIDIPSF
PDDTAPIGMLTCDYYKKLLRYYSKRHQNEVVKCYELLTVHLGVIPNEYILQHCSQLARKL
WEPTRIPLL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtctactggtggctaatgagagcgcagaggttttattctactggactgacaac
gagttcgagcagcggattcaggctcagtatgtggtttcccaggaggaaggagaacgactg
cctgcttttgaagacagcatcaacactctcttcgcacccatcatcatctcctgtagcacc
atggtggaccgactcggggacaattacacctccttcaacaccgaaaacaatcatatctat
gttctgcatcagtttgaggaatgtctatacatcgctgtgaatggagatggagatgagacc
gaagaggatttgaagagaaagatctatgtgatgaagaaactcacagaaataatgtttggg
atggtgacgctcagcggggccctcttgaggaaagaattgcgccctcaagagactgagcaa
aggaaccggttatggaagaagctacaaagcctcctggaaacgtacagccggttgcgagag
cacgaccaaagctttttagtggaggctgtggaaaggttgatccacccgaccctttgtgag
cagtgcatcgagtttctggagcgtcggctggtgcagcagatcaacagtaacgtggacaga
gcaggcgaggaggtgctgcacgctttcatactggtgcacaccaaactgctggccttctac
tccagtcgaaatgccagcagtctaaacccctctgatctcctggctctgatcatccttgtg
caggatctctaccccagcaaaatcgaccaagatgacactcctgaggagttagagagcagt
tcagttcctgatgtattctacacaccagagccctctcctcctgaacgggaatcagtagtc
cgcccaagaggtgacagtcctcctatcttccagtttgtggatgctgatgttcagatggct
gaggacagtctgaaaactcttgaagttccaacccctgacccctcagccccattcagagta
ttcctggaagccaaagagtgtcccatgatgcctcactccatgtattgcctgtctctctgg
cctggaatcactctagtgttgctcaccaagatccccaacagtcatatggcaatatctatt
tactactttctggaagcctttgtgaagctggagaagaggttgtgtgaggggcatgaaggg
tccgcggccacacggggtcagccctctgtccaggagcagcggggcagactggagaagtta
gtcaaagtctgggccagcatggacattcagacttcccatcttcaaaatgtgtggacagat
tttaagagcaaggccttcaccagatctggatctggattcacaagggatttgctgccctct
tgtcgaaacatgaagactcagttgtgtagtgtgtacaggcagttttttgcagctgaatgc
atgggcagcagtcagcgattggctcctcatctgcaagaacgcgctctgaacatggtccaa
gagaagttgatggactggaaggattttctgctggtgaaaagcaaaagaaatatcacaatg
gtgtcatacctggaagagtttcctggtctcgtccactttatctacgtggatcgttcaagt
ggtcaaatgatagcgccttcgctaaatgtgacggatcgcaccgtctctgagctcggaaag
ggacctctagctgacttcataaagaacaaggtttggagtcttgtggcaacaacacggcga
tacctacacaagggttacgccaccgtcacactccgagatggagattatttctactgttac
tttttgtggtttgaaaatgaaacgggctacaaactggaagtgatagatatacccagtttc
ccagatgacaccgctccaataggaatgctcacctgtgattattataagaaactgctgcgg
tattacagcaaaagacatcagaatgaagtggtgaagtgttatgaactgctgactgtgcat
ctaggtgtaatccccaatgaatatattcttcagcactgcagtcagctggcccgcaagctg
tgggagcccacccgtatcccgctcctgtga
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