Rhinichthys klamathensis goyatoka (western speckled dace): 130106463
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Entry
130106463 CDS
T09701
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130106463 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rkg03037
]
130106463 (bbs4)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
130106463 (bbs4)
Cilium and associated proteins [BR:
rkg03037
]
Primary cilia and associated proteins
BBSome
130106463 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_11
TPR_19
ANAPC3
TPR_16
TPR_14
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_6
ARM_TT21_2nd
TPR_7
TPR_15
Wzy_C_2
NatA_aux_su
ARM_TT21_4th
ARM_TT21_N
PknG_TPR
TPR_10
TPR-S
TPR_20
ARM_TT21_C
HAT_PRP39_C
HrpB1_HrpK
TPR_MalT
Clathrin
Motif
Other DBs
NCBI-GeneID:
130106463
NCBI-ProteinID:
XP_056128568
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MADDAIKTDVQLPAATDLKKPRLKKAPELPILERRNWLIHLHYIRKDYETCKAIIKEQLH
ETQGMCEYAVYVQALIMRLEGKIQQSLELFQSCAILNPKSSDNLKQVARSLFLLGKHKAA
IEVYNEAARLNQKDWEISHNLGICYIYTKDLRSAEEQLNLALQLNKHDLTFMMLGKIHVL
QGDTEKAIDVYKSAVEFSPENTELLTTLGLLYMQLGKYQKAFEHLGNALTYDPNNFKAIL
AAGSMMQTHGDYDVAMNKYRVAAYAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLS
PFDWKILYNLGLVHLTMQQYASAFHFLSAAINLRPRMSELYMLLAVALTNLDDADNARRS
YEQAVQLDESNPLVNLNFAVFQYNQGDKKAALQQFQEMERKVNAQVENDSNTEFDPEMVE
MAQKIGTALQAGENLYWSKPGKDGKTSHRSSSSSKTSSSQQPLGTNQALGQAMSSAAGYS
KSMQISTVPEADVSIAPSPPTVTPGDPEDEDEPDKLTEKKSKPKAVAE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgcgataaaaacggatgtgcagctgcctgcggccacagacctcaagaaa
cctcgtctaaagaaagctcctgagctcccaattctggagaggagaaactggcttatacat
ctgcattacatccgcaaagattatgagacctgcaaggccattattaaagaacagctgcat
gaaactcaaggcatgtgtgaatatgctgtgtatgtacaagctctgatcatgcggttagaa
gggaagatccagcagtctctggagttgtttcagagttgtgcaatcctcaaccccaaaagc
tcagacaacctcaagcaagtggcgcgatcacttttcctattagggaagcacaaagctgct
atcgaggtttataatgaagcagcgcgtctcaatcagaaagattgggagatcagccataat
ctgggcatttgctacatctacaccaaagacttaagaagtgcagaagagcagttaaacttg
gcattacagctgaataaacacgatctgaccttcatgatgctgggaaaaatccacgtactg
cagggggacacggagaaagccatcgacgtctacaagagcgctgtggagttttctcctgag
aacacggagctgttgaccacgctgggactgctctacatgcagcttgggaaataccagaaa
gccttcgagcacctcgggaacgctctgacatacgaccccaataacttcaaggccatcctc
gcggccggcagtatgatgcagactcatggagattatgacgtggccatgaacaagtatcgt
gtagcggcttacgctgtccccgagagccccccgctctggaataacatcggcatgtgcttc
ttcggcaaaaagaaatacgttgctgccatcagctgtctgaagagggccaactatctgtct
ccgtttgattggaagatcctgtataatctgggtttggttcacctcaccatgcaacagtac
gcgtcagctttccacttcctgagcgccgccatcaacctgcggccacgcatgagcgagctc
tacatgcttctggccgttgccctgaccaatctggatgacgcggataacgcccgcaggtct
tacgaacaggcggttcagctcgatgagtcaaacccgctggtgaacctgaactttgcggtg
ttccagtataatcagggcgataagaaggccgccctgcagcagttccaggagatggagagg
aaagtcaacgctcaggttgagaatgacagcaacacagagtttgaccctgagatggttgaa
atggctcagaaaataggcactgctctacaggcgggtgagaacctgtactggagcaaacca
ggcaaagacggcaagaccagccaccggtcctcctcctccagcaaaaccagcagctcccag
cagcccctgggcaccaaccaggccctgggtcaggccatgtcttcagccgcaggctacagc
aagagcatgcagatctccacagtgcccgaagcggatgtgagcatcgccccgtctccccct
acagtcactcccggagaccctgaggatgaggatgaacccgacaaactcacagagaagaag
agtaaacccaaagcagtggctgagtag
DBGET
integrated database retrieval system
