Rhodococcus koreensis: JWS14_04490
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Entry
JWS14_04490 CDS
T07497
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
rko
Rhodococcus koreensis
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rko03009
]
JWS14_04490
03016 Transfer RNA biogenesis [BR:
rko03016
]
JWS14_04490
Enzymes [BR:
rko01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
JWS14_04490
5.4.99.29 23S rRNA pseudouridine746 synthase
JWS14_04490
Ribosome biogenesis [BR:
rko03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JWS14_04490
Transfer RNA biogenesis [BR:
rko03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
JWS14_04490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QSE78451
LinkDB
All DBs
Position
complement(988783..989676)
Genome browser
AA seq
297 aa
AA seq
DB search
MAGAPLPVRNGLGPDRIRMPAGLGAKTVAEFLVETYPDERAHWLSLIDGGGVVDEHGRVV
DRGTRYAPTRFVYFYRDPAPEIPVPFEIDILHRDDHLVVIDKPHFLATIPRGAHITETAV
VRLRRTLDLPDLTPAHRLDRMTAGVLVFLIRPEDRRAYQELFVSQQVTKEYEAVAGHDPT
LEFPRIIRSRIVKEHGIMTATEEPGEPNSETVVDLIETRDGRARYRLLPKTGRTHQLRLH
MSSLGLPIEGDNYYPDFRRSEPGDFSTPLRLLARAIEFTDPRSGRVRRFESRRTLGW
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtggccggggcgccgctgcccgtccgcaacggtctcggtcccgatcgcatccggatgccg
gccgggctcggggcgaagaccgtcgccgaattcctggtcgagacgtaccccgacgagcgg
gcgcactggctgtcgctgatcgacggtgggggagtcgtcgacgaacacggccgggtcgtc
gaccgcggcacccgctatgcgccgacccgattcgtgtacttctaccgcgaccccgcaccc
gagatcccggttccgttcgagatcgacatcctccaccgcgacgaccacctcgtggtgatc
gacaagccgcatttcctcgcgaccatcccgcggggcgcgcacatcaccgagacggcggtc
gtgcggttacggcggacgctcgacctccccgatctcaccccggcgcaccggctcgaccgg
atgacggccggtgtgctggtgttcctgatccggccggaagaccgccgggcctatcaggaa
ctgttcgtctcccagcaggtcaccaaggaatacgaggccgtcgccgggcacgatcccacg
ctggagtttccgcgcatcatccgcagccgcatcgtcaaggaacacgggatcatgacggcc
acggaggagccgggagaaccgaacagcgaaaccgtcgtcgacctgatcgagacccgggac
ggccgcgcccggtaccggctgctgccgaagaccggccggacgcaccaactgcggctgcac
atgtcgtcgctgggactcccgatcgagggcgacaactactacccggacttccgccgatcc
gagcccggcgacttctcgaccccgttgcggttgctggcgcgggccatcgagttcaccgat
ccccgttcgggccgggtccgccggttcgagagtcgccgcacactcgggtggtga
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