Rhodococcus koreensis: JWS14_06745
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Entry
JWS14_06745 CDS
T07497
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rko
Rhodococcus koreensis
Pathway
rko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JWS14_06745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rko03019
]
JWS14_06745
03400 DNA repair and recombination proteins [BR:
rko03400
]
JWS14_06745
Enzymes [BR:
rko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JWS14_06745
Messenger RNA biogenesis [BR:
rko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JWS14_06745
DNA repair and recombination proteins [BR:
rko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JWS14_06745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
HEM4
KORA
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QSE78865
LinkDB
All DBs
Position
1454094..1456193
Genome browser
AA seq
699 aa
AA seq
DB search
MTTATEPALRDEAERLLRELAGEHATLRDDQWTAIEALVVGRRRALVVQRTGWGKSAVYF
IAAKLLRAHGHGPTVIVSPLLALMRNQVASAERAGVRAATINSGNVTEWDDIHTRVADNE
LDVLLVSPERLNNPDFRDQVLPSLAADAGLVVVDEAHCVSDWGHDFRPDYRRIRTLIAEL
GEGIPVLATTATANDRVVSDVSTQLGVGGAETLVLRGGLERESLHLSVVQIPEATARAAW
LAQKLDSLPGSGIIYALTVSAARDLASLLSEQGHTVAAYTGQTDAAERETLEQDLLGNRV
KALVATSALGMGFDKPDLGFVVHLGAPSSPISYYQQVGRAGRSTDRAEVILLPGSEDKQI
WSYFASVAFPREHVVRRVIEVLDTDRPQSTQALEPLVELGRTRLEMVLKVLDVDGAVRRV
RGGWVGTGEPWAYDADRYERLERARESEQQAMIEYQRITTCRMAFLREQLDDPGLAAGTS
DCGRCDNCTGERHDATVDAEAVQQTRARLERPGVDLAPRKQWPTGLAKLGVKLSGKISDG
PEPGRVLGRLSDLGWGQRLRSLLDEPDGPAPDAVLKACIQVLASWDWAERPTAVMAVESA
THPLLSASIAGQLATVGRLTDLGVLRLRPEHPPVSAANSAYRVAGLVDAWETPGVPEGTG
PVLLVDTLTDTGWTLTMAARTVRAAGAASVLPFALASLK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgccaccgaacccgcactccgtgacgaggccgaacggctgctccgcgagctg
gcaggcgagcacgccaccctccgcgacgaccagtggacggcgatcgaggcgctcgtggtg
ggccgcagacgggcgctcgtcgtccagcggacgggctggggcaagtcggcggtctacttc
atcgcggcgaagctcctgcgggcacacgggcacggtcccaccgtcatcgtgtcgccgctc
ctggcgctgatgcggaaccaggtggcctcggccgagcgcgccggtgtgcgcgccgccacc
atcaactccgggaacgtcaccgagtgggacgacatccacacacgggtcgcggacaacgaa
ctcgacgtgctgctggtcagccccgagcggctcaacaaccccgacttccgcgaccaggtc
ctgccctccctcgccgccgacgccggcctcgtcgtggtcgacgaggcgcactgcgtgtcg
gactggggtcacgacttccgtcccgactaccggcggatccgcacgctgatcgccgagctg
ggcgagggtatccccgtgctggccaccacggccacggcgaacgaccgcgtcgtctccgac
gtctccacgcagctcggggtgggcggcgcggagaccctcgtcctgcgcggcggcctcgaa
cgcgagtcgctgcacctgtcggtcgtgcagattccggaggccaccgcccgggccgcgtgg
ctcgcccagaagctcgacagtctgcccggctcgggcatcatctacgcgctcaccgtgtcg
gcggcccgggatctggcaagcctgctgtccgagcaggggcacacggtcgccgcatacacc
gggcagaccgacgccgccgagcgcgagaccctcgagcaggacctgctcggcaaccgcgtc
aaggcgctggtggccacgtccgcgctcgggatggggttcgacaagcccgacctggggttc
gtggtacacctcggtgcgccgtcgtcgcccatctcctattaccagcaggtcgggcgcgca
ggccggtccaccgaccgcgccgaggtgatcctgctgcccggatccgaggacaagcagatc
tggagctatttcgcgtccgtcgcgttcccccgcgagcacgtggtgcgccgggtgatcgag
gtcctcgataccgatcggccgcagtccacgcaggcgctcgaaccactcgtggagctcggc
cgcacccggctggagatggtgctgaaggttttggacgtggacggcgccgtgcgccgggtg
cggggcggctgggtgggcaccggggagccgtgggcgtacgacgccgaccggtacgagcgc
ctcgagcgggcccgcgaatccgagcagcaggcgatgatcgagtaccagcggatcaccacg
tgccggatggcgttcctgcgcgagcagctcgacgacccgggtctggcggcgggcacgtcg
gactgcgggcggtgcgacaactgcaccggagagcgccacgacgcgaccgtcgacgccgag
gcggtgcaacagaccagagcgcgcctcgagcgcccaggcgtggatctggcgccccgcaaa
cagtggcccacgggcctcgcgaagctcggcgtgaagctgtccgggaagatctccgacggt
cccgaaccgggtcgcgtgctgggccggctgtccgatctgggctggggtcagcgcctgcgc
tccctgctcgacgaaccggacggaccggcgcccgacgccgtcctgaaggcctgcatccag
gtgctggcgtcctgggactgggccgagcgtcccacggcggtgatggcggtcgaatcggcc
acccacccgcttctgtcggcgtcgatcgcggggcagctggccacggtgggccggctcacc
gacctgggagttctgcggctgcgccccgagcatccgccggtgtccgcagccaactccgcc
taccgggtggcggggctcgtcgacgcctgggagacccccggcgttcccgaaggcaccgga
ccggtgctgctcgtcgacaccctcaccgacaccgggtggaccctcacgatggccgcgcgg
acggtccgcgcggcgggtgccgcgtcggttctccccttcgcgctcgcgagtctcaaatag
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