Rhodococcus koreensis: JWS14_07670
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Entry
JWS14_07670 CDS
T07497
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rko
Rhodococcus koreensis
Pathway
rko00300
Lysine biosynthesis
rko00470
D-Amino acid metabolism
rko01100
Metabolic pathways
rko01110
Biosynthesis of secondary metabolites
rko01120
Microbial metabolism in diverse environments
rko01230
Biosynthesis of amino acids
Module
rko_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JWS14_07670 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JWS14_07670 (lysA)
Enzymes [BR:
rko01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JWS14_07670 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QSE79028
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All DBs
Position
complement(1653763..1655184)
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AA seq
473 aa
AA seq
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MNAHPAGPKHAEQLHAPGLPERPADAAAFAALSPEVWPRNARRAADGVVSLAGIPVTELA
EKYGTPLFVVDEDDFRSRCRDMARAFGPTAKVHYASKAFLCGEIARWVADEGLSLDVASG
GELAVALHAGFPAERIAMHGNNKSVAELTAAVSARVGHIVLDSATEIDRLDKVAAEAGVV
QDVLIRVTVGVEAHTHEFISTAHEDQKFGFSLAGGKAIDAVRRVFAADNLRLVGLHSHIG
SQIFDVDGFEVAAHRVIGLLRDAVAEFGVEKTAQISIIDLGGGMGISYVPTDDPPPVDQL
AAKLGDIVRHESALVGLPEPTLAVEPGRAIAGPGTVTLYEVGTIKDVTVGSNLTRRYVSV
DGGMSDNIRTALYQAEYEAKLVSRVSDAAPVVSRVVGKHCESGDIVIRDTWMPEDIDAGD
LLAVAATGAYCYSMSSRYNLLARPAVVAVRDGQSRVILRRETVEDLLSLEVQE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgcaccccgccggtcccaagcacgccgagcaactgcacgcgcccggtctgccc
gaacgtcccgccgacgcggccgcattcgcggcgctctctcccgaggtgtggccccgcaac
gcccgccgcgccgcggacggagtggtgagcctcgcgggcatcccggtcaccgaactggcc
gagaagtacggcaccccactgttcgtcgtcgacgaggacgacttccggtcccgctgccgc
gacatggcccgcgccttcgggccgacggccaaggtgcactacgcgtccaaggcgttcctg
tgcggcgagatcgcccgctgggtcgccgacgagggcctgtccctggacgtcgcgtcgggc
ggcgaactcgcggtcgcgctgcatgccggattcccggcggagcgaatcgccatgcacggc
aacaacaaatcggtcgccgagctgaccgccgccgtgtcggcccgggtcgggcacatcgtg
ctcgactccgccacggagatcgaccgcctcgacaaggtggccgccgaagccggtgtggtg
caggacgtcctgatccgcgtgacggtcggagtcgaggcgcacacccacgagttcatctcc
actgcccacgaggatcagaagttcgggttctcgctcgccggcggtaaggcgatcgacgcg
gtccggcgggtcttcgccgccgacaacctgcgtctcgtcggtctccacagtcacatcggc
tcgcagatcttcgacgtcgacggcttcgaggtggccgcgcaccgtgtgatcgggctcctg
cgggacgcggtcgcggagttcggcgtcgagaagaccgcccagatctcgatcatcgacctc
ggcggcggcatgggaatttcctacgtccccaccgacgacccgccgccggtcgaccagctc
gccgccaaactcggcgacatcgtgcgccacgagtcggcgctcgtcggtctgccggagccg
acgctggccgtcgaacccggccgcgcgatcgccggaccgggaacggtgacgctgtacgag
gtcggcaccatcaaggacgtcaccgtcggcagcaacctcacccgccggtacgttagcgtc
gacggcggtatgagcgacaacatccgcaccgcgctgtaccaggcggagtacgaggccaaa
ctggtctcgcgggtcagcgacgcggcgccggtggtgtcccgcgtcgtcggcaagcactgc
gaatccggtgacatcgtgatccgcgacacctggatgcccgaggacatcgacgccggcgac
ttgctcgcagtcgcggccaccggtgcatactgctattcgatgtcgagcaggtacaacctg
ctcgcccgccctgccgtggtggcggtgcgcgacggacagtcgcgcgtgatcctgcgcagg
gaaaccgtggaagacctgttgagcttggaggtacaagagtga
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