Rhodococcus koreensis: JWS14_09315
Help
Entry
JWS14_09315 CDS
T07497
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rko
Rhodococcus koreensis
Pathway
rko00260
Glycine, serine and threonine metabolism
rko00460
Cyanoamino acid metabolism
rko00630
Glyoxylate and dicarboxylate metabolism
rko00670
One carbon pool by folate
rko00680
Methane metabolism
rko01100
Metabolic pathways
rko01110
Biosynthesis of secondary metabolites
rko01120
Microbial metabolism in diverse environments
rko01200
Carbon metabolism
rko01230
Biosynthesis of amino acids
rko01240
Biosynthesis of cofactors
rko04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JWS14_09315
09102 Energy metabolism
00680 Methane metabolism
JWS14_09315
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JWS14_09315
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JWS14_09315
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JWS14_09315
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JWS14_09315
Enzymes [BR:
rko01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JWS14_09315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
TetR_C_45
Motif
Other DBs
NCBI-ProteinID:
QSE85112
LinkDB
All DBs
Position
2003774..2005036
Genome browser
AA seq
420 aa
AA seq
DB search
MVDLDPAVHAAIGAELARQQGTLEMIASENFAPLAVMQAQGSVLTNKYAEGYPGRRYYGG
CEHVDVIEQLAIDRLTALFGAGFANVQPHSGAQANAAAMAALLTPGDGILGLDLAHGGHL
THGMKLNFSGKLYDVAAYHVREDDHLVDMDEVERLAREHRPKLIMAGWSAYPRRLDFPRF
RAIADEVGAYLMVDMAHFAGLVAAGLHPSPVPHAHVVTSTTHKTLGGPRGGVILTNDAAL
AKKFNSSVFPGQQGGPLEHVIAGKAVAFKLAAEPEFAERQQRTLAGAKILADRLLQTDSR
AAGINVVSGGTDVHLVLVDLRESELDGKQAEDRLHRVGITVNRNAVPFDPRPPMISSGVR
IGTPALATRGFDEAAFTEVADIISHALRPATDEAGLTALRARVDALAAAFPLYPDLTETN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
ttggtggatctcgatccggccgtgcatgcggcgatcggggccgagttggcgcggcagcag
ggcaccctggagatgatcgccagtgagaatttcgcgccgctcgcggtgatgcaggcgcag
gggtcggtgctgaccaacaagtacgccgagggctacccgggccgccggtattacgggggg
tgtgagcacgtcgacgtgatcgagcagttggcgatcgaccggctcaccgccctgttcggt
gcggggttcgcgaatgtgcaaccgcattcgggggcgcaggccaacgccgcggcgatggcg
gcgctgctgacccccggtgacggcattctcgggttggatctcgcgcacggcggtcacctc
acgcacgggatgaagctgaacttctccggcaagctgtacgacgtcgccgcgtaccacgtc
cgcgaggacgaccacctcgtcgacatggacgaggtcgaacgcctggcccgcgagcaccgc
ccgaagctgatcatggccggctggtccgcgtacccccgccggctcgacttcccccggttc
cgggccatcgcggacgaggtcggcgcctacctgatggtcgacatggcgcacttcgccggc
ctggtcgccgccggactgcacccctcccccgtcccgcacgcgcacgtggtcacctccacc
acccacaagacgttgggtgggccccgcggcggcgtcatcctcaccaacgacgcggcgttg
gcgaagaagttcaactcctcggtgttccccggccagcagggcggcccgctcgagcacgtg
atcgccggcaaggccgtcgcgttcaagctcgccgccgaacccgaattcgccgaacgtcag
cagcgcaccctggccggcgcgaagatcctcgccgaccgcctgctgcaaaccgattcgcgg
gccgccgggatcaacgtcgtctccggcggcaccgacgtgcacctggtgctggtggacctg
cgtgagtccgaactcgacggcaagcaggccgaggaccggctgcaccgggtcggaatcacc
gtcaaccgcaacgccgtcccgttcgacccccgcccgccgatgatctcctccggggtgcgg
atcggcaccccggcgctggccacccgcggtttcgacgaggccgcgttcaccgaggtcgcc
gacatcatcagccacgcgctgcgcccggccaccgacgaggccggcctgaccgcgctgcgg
gcccgggtcgacgccctcgccgccgcgttcccgctctaccccgacctcacggagacgaac
tga
DBGET
integrated database retrieval system