Rhodococcus koreensis: JWS14_32215
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Entry
JWS14_32215 CDS
T07497
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
rko
Rhodococcus koreensis
Pathway
rko03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWS14_32215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rko03400
]
JWS14_32215
Enzymes [BR:
rko01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
JWS14_32215
DNA repair and recombination proteins [BR:
rko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JWS14_32215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
UPF0261
Motif
Other DBs
NCBI-ProteinID:
QSE83485
LinkDB
All DBs
Position
7097609..7098178
Genome browser
AA seq
189 aa
AA seq
DB search
MSFTRAELESFRDAEVPDLIGPGCRLLFVGINPGLWTAATGAHFARPGNRFYPALLGAGI
IERPIDPTAGMSDADRDHLIERGVGITNLAPRATAKADELTGEELAVGAERLRSVVRDTA
PRVVAVAGITAYRTAFGERAAKKGKQPSTLEGAELWLVPNPSGLNAHETVATLAASYREA
AIEAGIVSS
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttcacccgcgcggagttggagtcgttccgggacgccgaggttccggacctcatc
ggaccgggctgccgcctgctgttcgtcggcatcaacccgggactgtggacggccgcgacc
ggggcgcatttcgcacgtccgggcaaccgcttctatccggctctgctgggcgccgggatc
atcgagcgacctatcgatccgacggcaggcatgtcggacgcggatcgcgaccacctgatc
gagcggggcgtcggcatcaccaatctggccccgcgtgccacggcgaaagccgacgaattg
accggcgaggaactggccgtcggcgccgagcgcctgcgctccgtcgtccgcgacaccgct
cccagggtggtcgccgtagccggaatcaccgcctatcgcacggcattcggtgagcgtgca
gcgaagaagggcaaacagccgagcaccctcgagggtgcagagttgtggctggtgcccaat
cccagcgggctcaacgcccacgaaaccgtcgccaccctcgccgcgtcgtaccgggaggcg
gcgatcgaggccggaatcgtctcgagctga
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