Rhodococcus koreensis: JWS14_33980
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Entry
JWS14_33980 CDS
T07497
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rko
Rhodococcus koreensis
Pathway
rko00020
Citrate cycle (TCA cycle)
rko00190
Oxidative phosphorylation
rko00650
Butanoate metabolism
rko00720
Other carbon fixation pathways
rko01100
Metabolic pathways
rko01110
Biosynthesis of secondary metabolites
rko01120
Microbial metabolism in diverse environments
rko01200
Carbon metabolism
Module
rko_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rko_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rko_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JWS14_33980
00650 Butanoate metabolism
JWS14_33980
09102 Energy metabolism
00190 Oxidative phosphorylation
JWS14_33980
00720 Other carbon fixation pathways
JWS14_33980
Enzymes [BR:
rko01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JWS14_33980
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
DAO
Pyr_redox_2
FAD_oxidored
DUF6020
Motif
Other DBs
NCBI-ProteinID:
QSE83810
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Position
complement(7522286..7524037)
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AA seq
583 aa
AA seq
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MQEHRYDVVIVGAGGAGMRAAIEAGPRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLADQDAVEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYALDIAITETENGPVATGV
IAYELATGEIHVFHAKSIVFATGGSGRMYKTTSNAHTLTGDGMGIIFRKGLPLEDMEFHQ
FHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVLEVLEG
RGAGPNKDYVYIDVTHIPEEVLDEKLPDIMEFSRTYLGVDPVKEPVPVYPTCHYVMGGIP
TRINGEVLRNNDEIVQGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAAEHANN
SEFVALPETPEKMVDEWMATILSDHGHERVADIRTELQQSMDNNASVFRTEERLTQALKD
VRALKERYNHITVQDKGKRYNSDLLEAVELGFLLEMAEVTVVGALNRKESRGGHAREDFP
DRNDAEYMKHTMAYKEGDGLLSDIRLDYKPVVQTRYEPMERKY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacaccgttatgacgtggtcatcgtcggtgccggcggcgccggcatgcgcgca
gcgatcgaggccggtccccgcgcccgcaccgcggtactgaccaagctctaccccacccgc
agccacaccggcgcggcccagggcggcatgtgcgccgcgctggcgaacgtggaggaagac
aactgggagtggcacaccttcgacacggtcaagggcggcgactacctcgccgaccaggac
gccgtcgagatcatggccaaggaggccatcgacgcggtgctcgacctcgagaagatgggt
ctgccgttcaaccgcacgcccgagggcaagatcgaccagcgtcgtttcggtggtcacacc
cgcgatcacggtaaggcccccgtgcgccgcgcatgttatgccgcggaccgcaccggtcac
atgatcctgcagacgctctaccagaactgcgtcaagcacgacgtcgagttcttcaacgag
ttctacgccctcgacatcgcgatcaccgagacggagaacggcccggtcgccaccggcgtc
atcgcctacgagctggccaccggcgagatccacgtcttccacgcgaagtccatcgtgttc
gccaccggcggctcgggacgcatgtacaagacgacgtccaacgcgcacaccctcaccggt
gacggcatgggcatcatcttccgcaagggcctcccgctggaggacatggagttccaccag
ttccatccgacaggcctggccgggctcggcatcctcatctccgaggccgtgcgcggtgag
ggcggcatcctccgcaacgccgacggcgagcggttcatggagcgctacgcccccaccatc
aaggacctcgcaccccgtgacatcgtcgcgcggtcgatggttctcgaggtcctcgaggga
cgcggcgcgggaccgaacaaggattacgtctacatcgacgtgacccacatccccgaggaa
gtcctcgacgagaagctccccgacatcatggagttctcccgcacgtatctcggtgtggat
ccggtcaaggaacccgtgccggtgtaccccacctgccactacgtcatgggcggcatcccc
accaggatcaacggtgaggtcctccgcaacaacgacgagatcgtccagggcctgtacgcc
gcgggcgagtgcgcctgcgtgtccgtccacggcgcgaaccgtctcggcaccaactcgctg
ctcgacatcaacgtcttcggacgccgcgccggcatcgccgccgccgagcacgccaacaac
agcgagttcgtcgccctgccggagacgcccgagaagatggtcgacgagtggatggccacc
atcctgtcggaccacggtcacgagcgggtcgcggacatccgcaccgagctgcagcagtcg
atggacaacaacgcctcggtgttccgcacggaagagcgcctcacccaggcactcaaggac
gtgcgtgcactgaaggagcgctacaaccacatcacggtgcaggacaagggcaagcgctac
aacagcgacctgctcgaggccgtcgagctcggcttcctcctcgaaatggcggaggtcacg
gtcgtcggcgcgctgaaccgcaaggaatcgcgcggcggccacgcccgcgaggacttcccg
gaccgcaacgacgccgagtacatgaagcacacgatggcatacaaggagggcgacggcctg
ctctccgacatccgtctcgactacaagccggtagtccagacccgctacgagccgatggag
cgtaagtactga
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