Rhodococcus koreensis: JWS14_34645
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Entry
JWS14_34645 CDS
T07497
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rko
Rhodococcus koreensis
Pathway
rko03420
Nucleotide excision repair
rko03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JWS14_34645
03430 Mismatch repair
JWS14_34645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rko03400
]
JWS14_34645
Enzymes [BR:
rko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JWS14_34645
DNA repair and recombination proteins [BR:
rko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JWS14_34645
MMR (mismatch excision repair)
Other MMR factors
JWS14_34645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DUF3458_C
Motif
Other DBs
NCBI-ProteinID:
QSE83931
LinkDB
All DBs
Position
7659586..7662948
Genome browser
AA seq
1120 aa
AA seq
DB search
MTIRIDPVELAIGLGQHPPTPEQAAVIAAPLGPTLVVAGAGAGKTETMAARVVWLVANGV
VDPEAVLGLTFTRKAAQQLTARIRKRLARLAGSDLLRRVDPSGDLRSRILAGEPEVSTYH
SYAGRLLSEHGLLLPIEPSATLLSETELWQLAHRVVSSWDGDLDTDRNPASVTEAVLALA
GQLAEHLVEPDDLREAHTELDKLVHTLPAGPRQRGGPGKELLDILDTQHRRVELLPLVQR
LADTLRREGALDFGSQMSLAARVAADHPEVGLTERTRFRVVLLDEYQDTGHAQRVLLSSL
FGGGLDGELALTAVGDPMQSIYGWRGASAANLPRFATDFPLTNGDPAPTLELLTSWRNPP
EALALANMASASLRERGVAVSMLRARPQAVPGDVRLALTGDVVQEREWVADRIAEQYADA
ANRGEDPPTAAVLIRRNADAAPVAEVLRSRGLPVEVVGLGGLLHTPEVADVIAMLRVVAD
PMAGSAAVRMLTGARWQIGAADLTALSRRASELAIGTGYGTTGAVTDSAALADAVGEALP
GEHAEQAGLADALADPGPAERYSQVGYARITAVAAELASLRERIGQPLTELVAEVERVLG
IGIEAQARTRQSARGSAGREHLDAFADVVAGYANRTSATVTGLLAFLSAAESVEKGLAPG
EVEVDPHRVQVLTVHSAKGLEWEVVAVPHLTAGVFPSRTASGSWLGALGELPPSLRGDRE
RPGESADGVPVLELENLYDRKDLEEAVKAHKSALAARRLDEDRRLFYVALTRTERVLFAS
GHHWAESGTEPKGPSEFLTELRDTVTDEEHEGIGIVDLWAPTPEPEEQNPLTSTPKSAVW
PRDPLGLRREAVERGAALVVAALKNVGKQAPADEEDDPENWAADVDALLAEREARANART
EVVLPGQLSVSQLVELEADPDALAARLRRPLPFPPNPLARRGTAFHAWVERRFGATRLLD
LDELPGAADTGAGPDADLATLQDAFLRSPWADRNPTEVEVPFETSVAGTVLRGRIDAVFT
DPDGGWTVIDWKTGAEPSAANEKAVVMQLAAYRLAWAELMDVPIERVRAAFHYVRTGRTI
APDRLPGADALARLLRTAGAGEPDPADGGPEDELRRDAEL
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgaatcgacccggtggaactcgcgatcggactggggcagcatccgccgacc
ccggaacaggccgccgtcatcgcggcccccctcggcccgaccctcgtcgtcgcgggggca
ggcgcgggcaagaccgagacgatggccgcccgcgtcgtgtggctggtggccaacggggtc
gtcgaccccgaggcggtgctgggtctgacgttcacccgcaaggcggcgcagcagcttacc
gcccggatcaggaaacgccttgcccgtctggcgggttcggacctgctccgccgggtcgac
ccgagcggtgacctccggtcgcgcatcctcgccggcgaaccggaggtcagcacgtatcac
tcctacgccgggcgactgctgtccgagcacgggctcctgttgcccatcgaaccgtcggcg
acgctgctgtcggagacggaactgtggcagctggcgcaccgggtggtcagctcgtgggac
ggcgacctcgacaccgatagaaatccggcgtccgtcaccgaggcggtcctcgcgctggcc
gggcagctcgccgagcacctcgtcgaaccggacgacctgcgggaggcgcacaccgaactc
gacaagctcgtccacaccctgcccgccggaccgcggcagcgcggtggtcccggtaaggaa
ctgctcgacatcctcgacacccagcaccgccgggtggaactcttgccgctggtgcagcgg
ctcgcggacaccctgcgacgggaaggcgcgctcgacttcggcagtcagatgtcgctggcg
gcacgcgtcgccgcggaccaccccgaggtcggcctcaccgagcgcacccgtttccgggtg
gtgctgctcgacgagtaccaggacacgggacacgcgcagcgggtgctgctgtcgtcgctg
ttcggcggcggactcgacggcgaacttgcgctgaccgcggtgggcgatcccatgcagtcg
atctacggctggcgcggtgcgtcggcggccaacctgccccgcttcgccacggatttcccg
ctgacgaacggggatccggcgccgacgctggaactgctcaccagctggcgcaacccgccg
gaggccctggcgctggccaacatggcgtcggcgtccctgcgggagcggggcgtggcggtc
agcatgctgcgggcgcgaccgcaggccgtacccggggacgtgcggctggccctcaccggt
gacgtcgtgcaggaacgggaatgggtggccgaccgcatcgccgaacagtacgcggacgcc
gcgaaccggggcgaggatccgccgaccgccgcggtgctgatccgccgcaacgccgacgcg
gcaccggtcgcggaggtgctgcggtcgcggggtctgccggtcgaggtggtcggtctcggc
ggtctgctccacacgcccgaggtggccgacgttatcgcgatgctccgggtcgtcgccgac
ccgatggcgggcagtgccgccgtccggatgctgaccggcgcgagatggcagatcggggcc
gccgacctgacggcgctgtcgcggcgagcgtccgaactggccatcggaacgggctacgga
accaccggcgccgtcacggattcggccgccctcgccgacgccgtcggcgaggcgctgccc
ggtgaacacgcggagcaggcggggctggcggacgcgctggcggatcccggccccgcagaa
cgctattcgcaggtcggctacgcacggatcaccgcggtggcggcggagttggcgtccctg
cgcgagcggatcgggcagccgctcaccgaactggtggcggaggtcgaacgggtgctgggg
atcggcatcgaagcgcaggcccggacgcggcagtcggcgcgggggagtgcgggccgggaa
catctcgacgccttcgccgacgtcgtcgccggttacgcgaaccgcacgtcggccaccgtc
accggactgctcgccttcctgtccgccgcggaatcggtcgaaaaaggcctggcgcccggc
gaagtcgaagtggacccgcaccgcgtccaggtgctgaccgtgcactccgcgaaggggctg
gagtgggaagtggtggcggtgccgcacctcacggccggtgtctttccgtcgcggaccgcg
tccgggtcctggctcggtgcgctcggcgaactgccgccgtcgctgcgcggagaccgggag
cggccgggtgagtcggcagacggtgtacccgtcctcgaactcgagaacctgtacgaccgg
aaagacctcgaggaggccgtgaaggcgcacaagtcggcgctggcggcccgcagactggac
gaggaccgccggctgttctacgtcgccctcacccgcaccgaacgggtgctgttcgcttcg
ggtcaccactgggcagaatcgggaaccgagccgaaggggccgtcggagttcctcaccgaa
ctgcgcgacacggtgacggacgaggagcacgagggtatcgggatcgtcgatctctgggcg
cccacgcccgaacctgaggagcagaacccgctgaccagcactcccaagtcggctgtgtgg
ccgcgggatccgctcggtctccgccgggaggcggtcgagcgtggtgcggcgctggtcgtc
gcggcactgaagaacgtcggcaagcaggcgccggcggacgaggaggacgaccccgagaac
tgggcagccgacgtcgacgccctcctcgcggagcgggaagcgcgggcgaacgcccggacc
gaggtggtgttacccggccagctttcggtgagccagctcgtcgaactcgaggccgacccg
gacgccctggccgcccggctgcggcggccgctgccgttcccgccgaatccgctcgcgcgg
cgcggcaccgcgttccacgcatgggtggagcgccgcttcggggccacccggctgctcgat
ctcgacgagctgcccggtgccgcagacacgggtgcgggcccggacgccgatctcgcgacc
ttgcaggacgcgttcctgcgctcgccgtgggccgaccgcaacccgacggaggtcgaggtg
ccgttcgagacctcggtggcggggaccgtgctgaggggccggatcgacgcggtgttcacc
gaccccgacggcgggtggacggtgatcgactggaagaccggcgccgaaccgagcgcggcc
aacgagaaggccgtcgtgatgcagctcgccgcgtaccggctggcgtgggccgaactgatg
gacgttccgatcgagcgggtgcgcgccgcattccattacgtgcggaccggacggacgatc
gcgccggaccgcctccccggcgccgacgcgctcgcccgactcctccgtaccgccggcgcc
ggcgaaccggatcccgccgacggaggtcccgaagacgagctcaggcgtgacgccgagctt
tga
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