Rhodococcus koreensis: JWS14_35415
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Entry
JWS14_35415 CDS
T07497
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rko
Rhodococcus koreensis
Pathway
rko02024
Quorum sensing
rko03060
Protein export
rko03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JWS14_35415 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JWS14_35415 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWS14_35415 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rko02044
]
JWS14_35415 (ffh)
Enzymes [BR:
rko01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JWS14_35415 (ffh)
Secretion system [BR:
rko02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JWS14_35415 (ffh)
Eukaryotic Sec-SRP protein
JWS14_35415 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
TctA
APS_kinase
AAA_22
ArsA_ATPase
Zeta_toxin
AAA_16
AAA_31
AAA_18
NPHP3_N
AAA_33
MeaB
MobB
AAA_24
NTPase_1
Thymidylate_kin
NACHT
ATP_bind_1
CLP1_P
6PF2K
TsaE
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QSE84063
LinkDB
All DBs
Position
7820752..7822338
Genome browser
AA seq
528 aa
AA seq
DB search
MFESLSDRLTGALKDLRGKGRLSGADIDATCREIRLALLEADVALPVVRSFIAKIKERAK
GVEVSAALNPAQQVVKIVNEELVGILGGETRRLVFAKTPPTVIMLAGLQGSGKTTLAGKL
AKWLRDQGHTPLLVACDLQRPGAVTQLQIVGERAGATVFAPHPGTSIGGGDNELGITAAD
PVEVARAGVEEARTKQFDVVIVDTAGRLGIDADLMAQAAGIRDAVNPDETIFVLDAMIGQ
DAVSTAEAFREGVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASTGEKLEDFDVFHP
DRMASRILGMGDVLSLIEQAEQVFDQKQAEATAQKIGSGQLTLEDFLEQMMAVRKMGPIG
NLLGMLPGAGQMKDALANVDEKQLDRVQAIIRGMTPAERDDPKIINASRRLRIANGSGVK
VSDVNQLVDRFFEARKMMAAMAGRMGMPGARKPQRSKKGKKGKKGGKGPTPPKVRGGFPG
GLPGGFPGMPPGGLPAGMPDLSNMPKGLDELPPGLEGIDLSQLKLPKK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatccctttccgacaggttgaccggagccctcaaggatctgcgtggcaagggt
cgcctttccggagccgacatcgatgccacctgccgtgagatccggttggccctgctcgag
gcagacgtcgcgctgcccgtcgtccgctcgttcatcgccaagatcaaggaacgcgccaag
ggcgtcgaggtctcggcggcgctgaacccggcgcagcaggtcgtcaagatcgtcaacgag
gaactcgtcgggatcctcggtggcgagacccgccggctggtgttcgccaagacaccgccg
acggtcatcatgctcgccggtctgcagggttccggtaagaccaccctcgcgggcaagctc
gcgaagtggctgcgcgaccaggggcacaccccgctgctcgtcgcctgcgacctgcagcgt
cccggcgccgtcacccagctccagatcgtcggtgagcgcgcgggcgccacggtgttcgcg
ccgcaccccggcacgtccatcggcggcggcgacaacgagctgggcatcactgcggccgac
ccggtcgaggtggcccgggccggtgtcgaggaagcccgcaccaagcagttcgacgtggtc
atcgtcgacaccgcgggtcgcctgggtatcgacgccgacctgatggcgcaggccgcgggg
atccgcgacgccgtgaaccccgacgagacgatcttcgttctcgacgcaatgatcggtcag
gacgcggtcagcaccgccgaggcgttccgcgaaggtgtcggattcaccggtgtcgtgctc
acgaagctcgacggcgacgcccgcggtggcgccgcgctcagcgtccgcgaggtcaccggg
cagcccatcctgttcgcgtccacgggtgagaagctcgaagacttcgacgtcttccacccc
gaccgcatggccagccgcatcctcggcatgggtgacgtgctcagcctcatcgagcaggcg
gagcaggtcttcgaccagaagcaggccgaggccaccgcgcagaagatcggctccggccag
ctgaccctcgaagacttcctcgagcagatgatggcggtccgcaagatgggtcccatcggc
aacctcctgggcatgctcccgggtgcggggcagatgaaggacgctctggcgaacgtcgac
gagaagcaactcgaccgggtgcaggcgatcatccgcggtatgactcccgccgagcgcgac
gacccgaagatcatcaacgcgtcccgccgcctgcggatcgccaacggttccggcgtgaag
gtctccgacgtcaatcagctcgtggaccgcttcttcgaggcccgcaagatgatggccgcg
atggccgggcgcatgggcatgccgggtgcccgcaagccgcagcgcagcaagaagggcaag
aagggcaagaagggcggcaaggggccgacgccgccgaaggtgcgcggaggattccccggt
ggcctgcccggcgggttcccgggtatgccgcccggaggtctccccgcggggatgcccgac
ctgtcgaacatgccgaagggcctcgacgagttgccgcccggactggagggcatcgacctg
tcccagctgaagctgccgaagaagtag
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