Rhodococcus koreensis: JWS14_36015
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Entry
JWS14_36015 CDS
T07497
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rko
Rhodococcus koreensis
Pathway
rko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JWS14_36015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rko03019
]
JWS14_36015
03016 Transfer RNA biogenesis [BR:
rko03016
]
JWS14_36015
Enzymes [BR:
rko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JWS14_36015
Messenger RNA biogenesis [BR:
rko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JWS14_36015
Transfer RNA biogenesis [BR:
rko03016
]
Prokaryotic type
tRNA degradation factors
JWS14_36015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
S1_RRP5
KH_KhpA-B
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
QSE84166
LinkDB
All DBs
Position
7933970..7936243
Genome browser
AA seq
757 aa
AA seq
DB search
MTENSAVEVDEGVFESTAVIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDETMLLSATS
ASKHPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVD
GLRNEIQVVVTVMSLNPQDLYDVVAINAASASTQIAGLPFSGPVGGVRVALITSDENKAG
QWVAFPTVEQLENAVFDMVVAGRIVSGSGDDADVAIMMVEAEATDNVISLIDGGAQAPTE
TIVAEGLEAAKPFIARLCTAQQQLAVKAAKPTGDFPVFPAYQDDVFAAVEAAAAEKLSAA
LTIAGKQERDDKTDEVKVEVLEQVAPNFEGREKELGAAFRSLTKKLVRQRILRDQFRIDG
RGITDIRSLSAEVAIVPRAHGSALFERGETQILGVTTLDMVKMAQQVDSLGPETTKRYMH
HYNFPPYSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALSSNGST
SMGSVCASTLALLNAGVPLKAPVAGIAMGLVSDQVDGETRYVALTDILGAEDAFGDMDFK
VAGTKDFVTALQLDTKLDGIPSKVLAGALSQAKDARATILEVMAEAIDTPDEMSPFAPRV
TAIKVPVDKIGEVIGPKGKMINSITEQTGANISIEDDGTVFVGATDGPSAQAAIDMINAI
ANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGSGKRIAKVEDVVSVGSKL
RVEIADIDNRGKISLIPVEEDGAAAPAEQSEEAAAEK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaattccgcagtagaagtcgatgagggcgtgttcgaatccaccgccgtgatc
gacaacgggtccttcggaacccgcaccattcgtttcgagaccggtcgcctcgcgcagcag
gccgccggcgccgtcgtcgcctacctggacgacgagacgatgctgctgtccgcgacgagc
gccagcaagcaccccaaggagcacttcgacttcttccccctcacggtggacgtcgaggag
cgcatgtacgccgcgggccgcatccccggctcgttcttccgtcgtgagggccgcccctcc
acggacgcgatcctgacctgccgcctgatcgaccggccgctgcgtccgtcgttcgtcgac
ggcctgcgcaacgagatccaggtcgtggtcacggtgatgagcctgaacccgcaggacctg
tacgacgtggtcgcgatcaacgccgcgtcggcctccacccagatcgccggactgccgttc
tccggccccgtcggtggcgtgcgtgtcgcactcatcacgtcggacgagaacaaggccggc
cagtgggtcgcattccccaccgtcgagcagctcgagaacgccgtcttcgacatggtcgtc
gccggtcgcatcgtctccggcagcggtgacgacgccgacgtcgcgatcatgatggtcgag
gccgaggccaccgacaacgtgatctccctgatcgacggtggcgcacaggctcccaccgag
acgatcgtggccgagggcctcgaagccgccaagccgttcatcgctcgcctgtgcaccgca
cagcagcagctcgcggtcaaggcggccaagcccaccggtgacttccccgtcttcccggcg
taccaggacgacgtgttcgccgccgtcgaggccgccgcagcggagaagctcagcgcggcg
ctgaccatcgccggcaagcaggagcgcgacgacaagaccgacgaggtcaaggtcgaggtc
ctcgagcaggtcgccccgaacttcgagggacgcgagaaggaactcggcgcggcattccgc
tcgctgacgaagaagctggtccgtcagcgcatcctgcgcgaccagttccgcatcgacggc
cgcggcatcacggacatccgttcgctgtcggccgaggtcgccatcgttccgcgtgcccac
ggctccgctctgttcgagcgcggcgagacccagatcctgggtgtcaccaccctcgacatg
gtgaagatggcgcagcaggtcgattcgctcggacccgagacgaccaagcggtacatgcac
cactacaacttcccgccgtactccaccggtgagacgggacgcgtcggttcgccgaagcgc
cgcgagatcggtcacggcgcgctggcggagcgggctctcatgcccgtgctgcccagcgtc
gaggaattcccgtacgccatccgtcaggtctcggaggccctcagctccaacggctccacc
tcgatgggctccgtgtgtgcgtcgacgctcgcactgctcaacgctggtgtgccgttgaag
gctccggtcgccggtatcgccatgggcctcgtctccgaccaggtcgacggtgagacccgt
tacgtcgcgctcaccgacatcctcggtgccgaggacgcgttcggcgacatggacttcaag
gtcgcgggcacgaaggacttcgtcacggctctgcagctcgacacgaagctcgacggcatc
ccgtcgaaggtcctcgccggcgcgctgtcgcaggcaaaggacgcgcgggccacgatcctc
gaggtcatggccgaggccatcgacaccccggacgagatgagcccgttcgccccgcgcgtc
acggccatcaaggtccccgtcgacaagatcggtgaggtcatcggccccaagggcaagatg
atcaactccatcaccgagcagaccggcgccaacatctccatcgaagatgacggcaccgtg
ttcgtcggtgcgacggacggcccgtccgcgcaggccgcgatcgacatgatcaacgccatc
gccaacccgcagctgccgaaggtcggcgagcgcttcctgggtacggtcgtcaagaccacc
gccttcggtgcgttcgtgtcgctcctccccggccgcgacgggctggtgcacatctcgaag
ctgggcagcggcaagcgcatcgccaaggtcgaggacgtcgtgagcgtcggctcgaagttg
cgtgtcgagatcgccgacatcgacaaccgcggcaagatctcgctgatccccgtcgaggaa
gacggcgctgcggctccggccgagcagagcgaagaggcggctgccgagaagtag
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