Rhodococcus koreensis: JWS14_49510
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Entry
JWS14_49510 CDS
T07497
Name
(GenBank) relaxase domain-containing protein
Organism
rko
Rhodococcus koreensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
DEAD
UvrD_C_2
nSTAND_NTPase5
PIF1
Viral_helicase1
EryCIII-like_C
Peptidase_S41
Motif
Other DBs
NCBI-ProteinID:
QSE87020
LinkDB
All DBs
Position
unnamed3:complement(114780..120434)
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AA seq
1884 aa
AA seq
DB search
MTATMHKLTAGDGYTYLTRQVAAHDATERGRGALADYYSAKGESPGIWMGSGLAGLPKVS
TLSAGDRVSEAQMLALFGEGRHPNATEIEERRIKELVADGASMEAASRIALRETKLGNPY
RIHTGATEFRQAVAEAFVAQNLASERKWSAAIDDDQRARIRTEVAQSMFAKEFGRAPLDE
RELSGWVAKNSRQKTTAVAGFDVTFSPVKSVSTLWAISPREISEIIELCHHDASNDAMDF
FEKNALFTRLGTDGVQQVEVEGMLAAAFTHRDSRAGEPDLHTHIAISNKVKVAGQDKWLA
VDGRPLHKSMVAISETYNTRLEGYLRERLGVEFADRVGTDPTKRPIREIVGVDTRLTERW
SSRSAAISTRRGELAAQFQLDHGREPTASEMRKLAQRANLETREAKHEPRSLAEQRAAWR
QEAIQVLGTSRDVSDMVAAATTTRQRTGQVSIDDQWIGACADRALETISASRARWQPWHI
RAEAARIVRAENVDRADMDQAINAITNAALDTTRSVRLGPAEDLGEPGPLRRKNGASVYT
TEGSQLYTSESMLAAEQRLIDASQQTGGRAVTDLTVGLALLEHAANKFELKSSQAQMVRD
LATSGRRVHLALAPAGTGKTTAMAVLRSAWEAEGGTVLGLAPTAAAAAALAKDLSATTDT
LNKLTHTLDDLDAASGEPVKVPDWFSSIDDKSLVVIDEAGMASTADLDRVVRFVLARGGS
VRLVGDDQQLASVSSGGVLRDIDATAGSATLTDVVRFKDAAEGNASLALRDGNSEAIGFY
IDQGRIHVGDVLSAEDQVYSAWQSDRDNGLDAVMLAPTRETARGLNERARADRMTATGGE
FDGPETVLADGLAASAGDIITTRKNDRRLVIGATDFVRNGDRWTVDLVHENGALTVHRQS
DGRKITLPASYVTEHVQLGYARTIHAAQGLTADTCHTIFTGSEPRQLLYVALTRGKLGNH
AYLASALDGDDHSMITPDALAPPTAVDLLTRILARDGAQESATTASRRLADPAERLALAA
PAYDDAVGTAAENVLGAEAMARIDAGAEQLHPGLTEAAAWPVLRKHLATIAVSGDDALAA
LSAAAKSRELGTAADVAAVLDWRLDHSGNHSRSSGQLPWLPSIPTALADDPTWGSYLTRR
SELVQELSDAISVRARGWDSDTAPVWARGLLDDADLIADLAVWRAARGIADVDLRPTGPE
QYSIALRTHQRRLDRRVEKVVGSPNAAMATWRQLIEKVEPRILADPFWPVLALRLTTARR
AGLDVPTLVRSVTADRALPDEMPGAALWWRLSRTLSPAALATGTSGRHLTPDWAHVLDDV
LGDDLARRVRDDSAWPALVSAMDAAPLDRTHHEILTFARDAVADAANDGDDHDALRPSEL
TRALAWRISALTHHELAHTDIPLTEEAPADPDEELVAAAHAGKDDPYAVAEPARRSTGTD
RHLTLPGADVPQDRELPPLPEPDYYPPLSDADVPPDPDLPPPPDEYDYEPAELHLDAAHH
VAAAPLPEDGYHDLDTHDQLSSLHADLAAARADLTAQETAVRANQGTYMNAAWPMIREMR
ERADALRPLYFASEDAHEAWMTASQELEDLDHRCAEISRSAGQLRDAGNELDALSAEAEL
SLVEIMREHAQAEQERSRGEYEDAREQLEQAAGGPTGIVTSSDVEIARSVASELDEQALA
AARRKVTALGGALVRVETHAAHLAAHDAAADTELPAPPHQDGRAATATATLPRVDIDQEG
PARGRPTGVPQETAELSEQLDTSGADQEQEESLEQDGARPQLDRAAVEARVIQGNKVVQM
PSAELKSKLKQTMLTQRMNPTDTGQATVDRYRGELTRRAELPRDERAVEDAVRQRLSEQN
RRIDRGRATPDTGPRRDRDRGLDR
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgaccatgcacaagctcacggcgggagacgggtacacctacctgactcgccag
gtggcggcgcatgacgcgaccgagcgcggacgcggagcactcgccgactactactccgcg
aagggtgaatcccccggcatctggatgggatccggcctggccggattgccgaaggtcagc
acactcagcgccggagatcgggtcagcgaggcgcagatgctcgccctcttcggcgaggga
cgacacccgaatgccaccgagatcgaagagcgccgcatcaaggaattggtagcggacggc
gcgagcatggaagcggcttcccggatcgcgctccgcgaaaccaaactcggaaacccgtac
cggatccacaccggtgccaccgagttccgccaggccgtcgcggaagcctttgtcgcccaa
aaccttgcctccgaacgcaagtggagcgccgcgatcgacgacgatcaacgggcccgcatc
cgcaccgaagtagcccagtcgatgttcgccaaagagttcggtcgagcaccgctcgacgag
cgcgaactcagcggctgggtcgcgaagaactcacggcaaaagacgaccgcggtcgccgga
ttcgacgtcaccttctcccccgtgaagtcagtcagcacgttgtgggcgatatcgccccgg
gagatctccgagatcatcgagctgtgccaccacgacgcgtcgaacgacgccatggacttc
ttcgaaaagaacgcactcttcacccgcctcggcaccgacggagtccagcaggtcgaggtc
gagggcatgctcgctgcggcgttcacccaccgcgattcccgcgccggtgaacccgatctg
cacacccacatcgcgatcagcaacaaggtcaaggtcgccgggcaggacaagtggctcgcc
gtcgatggacgtcccctgcacaagtccatggtcgccatctccgagacctacaacacccgc
ctcgagggatacctgcgagagcggttgggagtcgagttcgccgaccgcgtcggcaccgat
ccgacgaagcgcccgatccgcgaaatcgtcggcgtggacacccgactgaccgaacgctgg
tcctcccgatctgcggcgatctccacccgccgaggcgaactcgcagcgcagttccagctc
gatcacggccgcgaacccaccgccagcgagatgcgcaaactcgcgcaacgggccaacctc
gagacccgcgaagccaagcacgaaccacgctctctggccgagcagcgcgccgcgtggcgg
caggaggcaatccaggttctcggcacctcccgagacgtctccgacatggtggcggccgcg
accacgacgcgtcagcgcaccggccaagtgtccatcgacgatcagtggatcggtgcctgc
gccgaccgcgcactcgagacgatcagtgcttctcgggcacgctggcaaccctggcacata
cgcgcggaagcggcccgaatcgtccgcgcagagaacgtcgaccgcgccgacatggaccag
gcaatcaacgcaatcaccaacgctgctttggacacgacccgatccgtcaggctcggcccc
gccgaagacctcggagagcccggaccactgcgccgcaagaacggtgccagcgtctacacc
accgagggatcccagctctacacgagcgagtcgatgcttgccgcagagcaacgactgatc
gacgcctcacagcagaccggcggccgcgccgtcaccgacctgaccgtcggtctcgccctt
ctcgaacacgcggcaaacaagttcgagctcaagtcctcgcaagcgcagatggtccgggat
ctggcaacctccggtcgccgagtgcacctggcgctcgccccggcgggcaccggcaagacc
accgcgatggcggtgcttcgctccgcctgggaagccgagggcggcaccgtgctcgggctt
gcgccgaccgccgcggccgcagctgcactcgccaaggacctctccgccactaccgacacc
ctcaacaaacttacccacactctcgacgacctcgacgcggcctccggcgagccggtgaag
gtgcccgactggttctcctcgatcgacgacaagagtctcgtggtgatcgacgaagcgggc
atggcatcgacagccgacctcgaccgcgtggtgagattcgtcctcgctcgcgggggcagc
gtccgcctcgtcggcgacgaccagcagcttgcctccgtctcgtcgggcggtgtcctgcgg
gacatcgacgccaccgcaggatcggccactctcaccgacgtcgtgcggttcaaggacgcc
gccgaaggcaacgcctccctcgctctgcgcgacgggaattcggaggcgatcggcttctac
atcgaccaaggccggatccacgtcggggacgtcctctcggccgaagaccaggtctacagc
gcatggcagagcgaccgcgacaacggtctcgacgccgtcatgctcgcaccgacccgcgag
actgcccgaggactgaacgaacgcgctcgcgccgaccggatgacggccaccggcggcgag
ttcgacggtccggagacggttctcgccgacggactcgcggcatcggccggcgacatcatc
accacccgcaagaacgatcgccgactcgtcatcggggccaccgacttcgtccgcaacggt
gaccgctggaccgtcgacctggtgcacgagaacggggcgctcaccgtgcaccggcagagc
gacggccggaagattacgctccccgccagctacgtcaccgagcacgttcagctcggctac
gcgcgcaccatccacgcggcccagggcttgaccgccgacacctgccacacgatcttcacc
gggtccgagccgcggcaacttctctacgtcgcgctcacccgcggcaagctcggcaaccac
gcgtatctcgcgtcggccctcgacggcgacgaccactcgatgatcactccggatgcgctg
gcaccgccgaccgcggtcgacctgctcactcgcatcctcgcccgggacggcgcgcaggag
tccgcgaccaccgctagccgccgcctcgccgatcccgccgagcggctggcgctcgccgca
cccgcgtacgacgacgcggtcggcacggccgccgagaacgtgctcggcgccgaagcgatg
gcccgtatcgacgccggtgccgaacagctccatcccgggcttaccgaggcggccgcctgg
ccggtgctgcgcaagcatctggcgacgatcgcggtgtccggggatgacgcgctggccgcg
ctgtccgcggccgcgaagtcacgggaactgggtaccgctgccgacgtggccgcggtcctc
gactggcgactcgaccacagcggtaaccactctcgcagcagtggccagttgccgtggctg
cccagcattcccaccgcgctggccgacgacccgacctggggcagctacctcacgcgccgg
tccgaactcgtgcaggaactgtccgacgccatctccgtgcgggcccgcggttgggacagc
gacaccgccccggtgtgggcgcggggtctgctcgacgatgctgatctgatcgccgatctt
gcggtctggcgggcggcccgcggtatcgccgacgtggacctgcgaccgaccggaccggag
cagtactccatcgcgctccggacccaccaacgtcgcctcgaccgccgtgtcgagaaggtc
gtgggatcaccgaacgcggcgatggcgacctggcgtcagctgatcgagaaggtcgaacct
cgcatcctcgccgaccccttctggccggtgctcgcgttgcggttgaccaccgctcgccgg
gccggactggacgtgcccacgctcgtgcggtcggtgactgccgaccgtgcgctgcccgac
gagatgcccggggcggcactgtggtggcggctgtcgcggaccctctcccccgcagcgctg
gcgaccggaacgtcgggtcgacacctcaccccggactgggcgcacgtactcgacgacgtg
ctcggtgacgacctcgcccgccgcgttcgtgacgactccgcctggcctgcactcgtatcc
gcaatggacgccgcaccgctcgaccggacccaccacgagatcctcacgttcgcccgcgac
gcggtcgccgacgcagccaacgacggcgacgatcacgatgcgctacggccgtccgagctc
acccgcgccctcgcctggcgcatcagcgctctgacgcaccacgaactcgcacacaccgat
atcccgctgaccgaggaagcccccgccgaccccgacgaggaactggtcgccgcggcccac
gcaggcaaggacgacccgtacgccgttgccgaaccggcccgccgcagcaccgggacggac
cgtcacctgacgctgccgggcgccgatgtgccgcaggaccgcgagcttccgccgctgccg
gagccggactactacccgccgctgtccgacgccgatgtgccgccggacccggacctcccg
ccgccaccggacgagtacgactacgagcccgcggagctgcatctggacgccgcacaccac
gtggcggccgcaccactgcccgaggacggctaccacgacctcgacacccacgatcagctg
tcgtcgttgcacgccgacctcgctgcggcccgcgccgacctgaccgcgcaagaaacggca
gtgcgcgcgaaccagggcacctacatgaacgcggcgtggccgatgatccgcgagatgcgg
gagcgcgccgacgccctgcggccgttgtacttcgcctccgaagacgcacacgaagcgtgg
atgaccgcgtcccaggaactcgaagacctcgatcaccggtgtgccgagatcagccgctcc
gcgggccagcttcgggacgcgggcaacgaactcgatgcactctccgccgaggcggaactg
tcactggtggagatcatgcgcgagcacgcacaggcggagcaggagcggtctcggggcgag
tacgaggacgcccgggagcagctcgagcaggccgccggcggaccgaccggcatcgtcacg
tcctccgacgtcgagatcgcccgctccgtggcctccgagcttgatgagcaggccctggct
gccgcccggcggaaggtcaccgcactcggtggagcgctggtccgcgtcgagacccatgcc
gcacacctggccgcccacgacgccgcggccgacaccgagctacccgcacccccgcaccag
gacggccgcgcagcaacggcaacagcaaccctgccgcgagtcgacatcgaccaggaaggc
ccggcccgcggacgccctaccggcgtgccacaggagacggccgagctgtccgagcagctc
gacacttccggcgccgaccaggagcaagaagagtccctcgagcaggacggggcgcgtccg
caacttgaccgtgcggcggtcgaggcgcgggtcatacagggaaacaaggtcgttcagatg
cccagcgcggagctgaagtcgaagctcaagcagacaatgctcacgcagcggatgaacccg
accgacaccggtcaggccaccgtcgaccgctaccgcggcgagctgacccgccgcgccgaa
ctgccccgcgacgagcgcgcagtcgaagacgctgtgcgccagcgcctgagcgagcagaac
cgacgcatcgaccgcggccgcgcaactccggacaccggcccacgccgtgaccgtgaccgc
ggactcgaccgatga
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