Rothia kristinae: I6G21_00120
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Entry
I6G21_00120 CDS
T06977
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rkr
Rothia kristinae
Pathway
rkr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G21_00120 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkr03021
]
I6G21_00120 (rho)
03019 Messenger RNA biogenesis [BR:
rkr03019
]
I6G21_00120 (rho)
Transcription machinery [BR:
rkr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
I6G21_00120 (rho)
Messenger RNA biogenesis [BR:
rkr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I6G21_00120 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
NACHT
CoV_NSP2_C
Motif
Other DBs
NCBI-ProteinID:
QPT53670
UniProt:
A0A7T3CGC1
LinkDB
All DBs
Position
complement(24201..26267)
Genome browser
AA seq
688 aa
AA seq
DB search
MTETTDLSTGTDQPGETPAQDSRAAAGAEQSQKGQGGLSALKLAQLQSLASQLGITGARR
MRKSALVDAISAHQRGSAVADREKKAEQAAAAAAEVTGQDAPAEQKPARRTRSRRADSAP
ETEQSGSGAEQGGEQKSPEQKNAEQKGSSRRGRGGDERSGEQDGSQDKQEKAKGQNGRGS
RGEDHDGGQDQRESKGERGQNRRSRQERSAERGSGDKGGEKHSEKSGSEKNHGDKGEGQH
GGGRNGESKGSRGNRRGNNGNNGPEDDDNRRGGRNRRNRNRNDRRDRRRGRNSGPEVDDT
ELTEDDVLLPVAGILDVLDNYAFVRTSGYLPGPNDVYVSLAQVKKHHLRKGDAVVGAIRA
PRDGEQQNSSRQKFNALVQLTSVNGKKPEELTERVEFTKLTPLYPNERLRLETDPKKIGP
RVVDLVSPIGKGQRGLIVSPPKAGKTLMLQSIANAIKENNPEVHLMMVLVDERPEEVTDM
QRTVNGEVIASTFDRPADDHTTVAELAIERAKRLVELGHDVVVLLDSMTRLGRAYNLAAP
ASGRILSGGVDSAALYPPKRFFGAARNIENGGSLTILATALVETGSRMDEVIFEEFKGTG
NMELRLSRHLADKRIFPAVDVNESGTRREENLLSPDEVKIMWRLRRVLAGLDQQQALEVL
TSKLRDTPTNVQFLMQVQKTTLGSKSDD
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaacgaccgacctgtccacgggtacggaccagccgggcgagaccccggcccag
gactcccgcgccgccgcgggagccgagcagagccagaagggccagggcggactgtccgcc
ctgaagctggctcagctgcagtccctggcctcccagctggggatcaccggcgcgcgccgc
atgcgcaagtccgcgctggtggacgccatctccgcgcaccagcgcggctccgcggtcgcc
gaccgggagaagaaggccgagcaggccgccgccgcggccgccgaggtcaccggccaggac
gccccggccgagcagaagccggcgcggcgcacccgctcccgccgggccgactccgccccg
gagaccgagcagtccggatccggcgccgagcagggcggcgagcagaagagccccgagcag
aagaacgccgagcagaagggctcctcccgccgcggacgcgggggagatgagcgctccggg
gagcaggacggctcccaggacaagcaggagaaggccaagggccagaacggccgcggctcc
cgcggcgaggaccacgacggcgggcaggaccagcgcgagtccaagggcgagcgcgggcag
aaccgccgctcccgccaggagcgcagcgccgagcgcggctccggggacaagggcggggag
aagcactccgagaagtccggctccgagaagaaccacggggacaagggcgagggccagcac
ggcggcggccggaacggcgagtccaagggctcgcgcggcaaccgccgcggcaacaacggc
aacaacggccccgaggatgatgacaaccgccggggcgggcgcaaccgccgcaaccgcaac
cgcaacgaccgtcgggaccggcgtcggggccgcaacagcgggcccgaggtggatgacacc
gagctgaccgaggacgacgtgctgctgcccgtggccggcatcctcgacgtcctggacaac
tacgccttcgtgcgcacctccgggtacctgcccggacccaacgacgtctacgtctccctc
gcccaggtcaagaagcaccacctgcgcaagggcgacgccgtcgtcggcgcgatccgcgcc
ccccgcgacggcgagcagcagaacagctcccggcagaagttcaacgcgctggtgcagctg
accagcgtcaacggcaagaagcccgaggagctcaccgagcgcgtcgagttcaccaagctc
acgccgctgtacccgaacgagcggctgcgcctggagaccgacccgaagaagatcggcccc
cgcgtggtggacctggtctccccgatcgggaagggccagcgcggcctgatcgtctccccg
ccgaaggccggcaagacgctgatgctccagtcgatcgccaacgcgatcaaggagaacaac
cccgaggtgcacctgatgatggtcctcgtggacgagcgtcccgaagaggtcacggacatg
cagcgcacggtcaacggcgaggtcatcgcctcgaccttcgaccgccccgccgatgaccac
acgaccgtcgcggagctggccatcgagcgcgccaagcgcctggtggagctgggccacgac
gtcgtcgtgctgctggactcgatgacccgcctgggccgggcctacaacctcgccgcccct
gcttccggccggatcctctccggtggtgtggactccgcggcgctgtacccgcccaagcgg
ttcttcggcgcggcccgcaacatcgagaacggcggctcgctgaccatcctggccaccgcc
ctggtggagaccggatcgcgcatggacgaggtgatcttcgaggagttcaagggcaccggc
aacatggagctgcgcctgtcccgccacctggcggacaagcggatcttcccggccgtggac
gtcaacgagtccggtacccgccgggaggagaacctgctctccccggacgaggtcaagatc
atgtggcgcctgcgccgcgtgctggccgggctggatcagcagcaggccctggaggtgctc
acctccaagctgcgcgacacgcccaccaacgtgcagttcctcatgcaggtgcagaagacc
acgctgggctccaagtccgacgactag
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