Rothia kristinae: I6G21_01660
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Entry
I6G21_01660 CDS
T06977
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rkr
Rothia kristinae
Pathway
rkr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G21_01660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkr03019
]
I6G21_01660
03009 Ribosome biogenesis [BR:
rkr03009
]
I6G21_01660
Enzymes [BR:
rkr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6G21_01660
Messenger RNA biogenesis [BR:
rkr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6G21_01660
Ribosome biogenesis [BR:
rkr03009
]
Prokaryotic type
rRNA helicases
I6G21_01660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
Hydrolase
adh_short
UvrA_inter
Cas3-like_C_2
GET4
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPT53944
UniProt:
A0A7T3CGW0
LinkDB
All DBs
Position
complement(367609..369702)
Genome browser
AA seq
697 aa
AA seq
DB search
MRGDIRPPARSSPGHDPRQAKDLSVSENTTPLPDDARTTPADPETQTAETAPAETQQPEQ
TQQAETPAPAAEASSAEAAPAEEPAGPRFVELGLDGRVLAALEEIGYETPSPIQAETIPL
LLEGRDVVGLAQTGTGKTAAFALPALSHLAELSDLEGLSKAVQVLVLAPTRELALQVGEA
FSSYAKHLEDFTVLPVYGGSPYGPQLAGLRRGAQVVVGTPGRVIDHLKRGSLDLSQLRHL
VLDEADEMLRMGFAEDVEEILSQTPAEKQVALFSATMPKSIRRIAEDYLRDPVEVRVKAK
TTTAANIRQRYMQVMHSHKLEAMTRVLEVEDYDGVIAFVRTKKETEEVADKLKARGFQAA
AINGDIPQTQRERTVEALREGRVDILVATDVAARGLDVERISLVVNFDIPHDTESYVHRI
GRTGRAGREGEAILFMTPREKHMLRQIEKATHQKVEQMHMPSAADVNQSRLDNFAQQITE
TLESEDLTLFKGLVEGYVAEHDVPAEDVAAAIAFIAQDGRPFFAEELPERPARGRDRERG
DRDGGRERGPRRRSDEGLRTYKIQVGHDQRVLPGAIVGALTNEGGLTGSQVGNIDIRGGF
SLVDLPEDLDVDSLRDLEINGHRIDIAPDRGGRAGGGRSGGRPGGRGQGGPRGGYRGGRD
RDGRGGYRGNRDRGDRGGYRGHRDRFERGGREGYRGR
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaggggagacatccggcctccggcgagatcttcgccgggacacgacccccgccaagca
aaggacctttcggtgagcgaaaacaccacccccctgcccgacgacgcccgcaccaccccc
gcggaccccgagacccagacggccgagaccgccccggctgagacccagcagcccgagcag
acccagcaggccgagactccggcccccgccgcggaggcctcctccgccgaggccgccccg
gccgaggagcccgccgggccccgcttcgtcgagctcggcctggacgggcgagtgctggcc
gcgctggaggagatcggctacgagaccccctccccgatccaggcggagaccatcccgctg
ctgctggagggccgcgacgtcgtcggcctggcccagaccggcaccggcaagaccgcggcc
ttcgcgctgccggccctgtcccacctggccgagctgtccgacctggagggcctctccaag
gccgtgcaggtgctggtgctcgcccccacccgcgagctggccctgcaggtcggggaggcc
ttctcctcctacgccaagcacctcgaggacttcaccgtcctgcccgtgtacggcggctcc
ccctacggcccccagctggccggtctgcgccgcggcgcgcaggtcgtcgtcggcaccccc
gggcgcgtcatcgaccacctcaagcgcggctccctggacctgtcccagctgcgccacctg
gtgctggacgaggccgacgagatgctgcgcatgggcttcgccgaggacgtcgaggagatc
ctctcccagacccccgcggagaagcaggtggccctgttctccgcgaccatgcccaagtcc
atccgccgcatcgccgaggactacctgcgcgacccggtggaggtgcgcgtgaaggccaag
accaccaccgcggcgaacatccggcagcggtacatgcaggtcatgcactcccacaagctc
gaggccatgacccgggtgctggaggtcgaggactacgacggcgtgatcgccttcgtgcgc
accaagaaggagaccgaggaggtcgcggacaagctcaaggcccgcggcttccaggccgcc
gcgatcaacggggacatcccccagacccagcgggagcggaccgtggaggccctgcgcgag
ggtcgggtggacatcctcgtggccaccgacgtcgccgcccgcgggctggacgtggagcgg
atctccctggtggtcaacttcgacatcccgcacgacaccgagtcctacgtgcaccggatc
gggcgcaccgggcgggccgggcgcgagggtgaggccatcctgttcatgaccccgcgcgag
aagcacatgctgcgtcagatcgagaaggccacgcaccagaaggtcgagcagatgcacatg
cccagcgccgcggacgtgaaccagtcccgcctggacaacttcgcccagcagatcaccgag
accctcgagtccgaggacctgaccctgttcaagggcctggtggagggctacgtcgccgag
cacgacgtccccgccgaggacgtcgccgccgcgatcgcgttcatcgcccaggacgggcgc
ccgttcttcgccgaggagctgccggagcgtccggcgcgcggccgggaccgggagcgcggg
gatcgcgacggcggtcgggagcgcggcccgcggcgtcgcagcgacgagggcctgcgcacc
tacaagatccaggtgggccacgatcagcgggtgctgcccggcgcgatcgtcggggccctg
accaacgagggcgggctgaccggctcccaggtcggcaacatcgacatccgcggcggcttc
tccttggtggacctgccggaggacctggacgtggactccctgcgggacctggagatcaac
ggccaccggatcgacatcgccccggatcgcggcggtcgcgccggcggcgggcgctcgggc
gggcgtcccggcggacgcggccagggcggtccccgcgggggctaccgcggcgggcgtgac
cgggacggccgcggcggctaccgcgggaaccgggaccgcggggatcgcggcgggtaccgg
gggcaccgggaccgcttcgagcgcggcgggcgcgagggctaccgcggccgctga
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