KEGG   Rothia kristinae: I6G21_05915
Entry
I6G21_05915       CDS       T06977                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rkr  Rothia kristinae
Brite
KEGG Orthology (KO) [BR:rkr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rkr03400]
    I6G21_05915
Enzymes [BR:rkr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     I6G21_05915
    5.6.2.6  RNA 3'-5' helicase
     I6G21_05915
DNA repair and recombination proteins [BR:rkr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    I6G21_05915
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD WH3_Lhr WH2_Lhr Helicase_C ResIII AbiEi_4 DUF6406 PhoH
Other DBs
NCBI-ProteinID: QPT52872
UniProt: A0A7T3F6H3
LinkDB
Position
complement(1336207..1341711)
AA seq 1834 aa
MPHALDRFTPATRDWFAGAFGAPTAAQEGAWEAIAQGRHALVVAPTGSGKTLAAFLWALD
RLLLGGGGASGGGADDAEAATPARHGGDAGRTGKRRTNATQVLYISPLKALGVDVERNLR
APLVGITQTARFQGTEPREISVGVRSGDTPAAERRALLSNPPDILITTPESLYLMLTSKA
RSSLTQVHTVIVDEVHAVAGTKRGAHLAVTLERLDQILPSPAQRIGLSATVEPVETVARF
LGGTTPVTVVRPEAAKTWDLTVSVPVPDMSNLTVPVPREQPRVRTGIDRGSAASGTATLE
DALGLDLASPLAGRQNDDAAVTPLPPEPVHEVVASIWPHVEERIVDLVEAHRSTIVFANS
RGLAERLTSRLNEVHAFRQVQRGLLDPEQTPGRRGSAGAGIREQRMGAGEARAAASSGGA
SGTVSAAASGGPVPDADAAAEMPYAPPAVNHLTSGTAAPELARAHHGSVSKDQRALIEDA
LKTGALRCVVATSSLELGIDMGAVDLVIQVESPPSVASGLQRVGRAGHQVGETSRAVLYP
KHRGDLRDAAVTVERMRAGAIEKLHVPANPLDVLAQQTVATAALGPIDVEAWFEALRRTA
PFAALPRSAFDAVLDLLAGKYPSDEFAELRPRLIWDRDGGVLEPRPGAQRIAVTSGGTIP
DRGLYPVFIVGGDEQTGPKRVGELDEEMVYESRAGDVIALGATSWRIEEITHDRVSVTPA
PGQVGKLPFWHGDGPGRPVDLGEAVGGFTRELASRLETGQDDAARTRLREAGLDEWAADN
LLAYVREQTEATGQVPSEKTLVVERFRDELGDWRVILHSPYGMPVHGPWALAVGARIEQR
WGLDGSAMAADDGIVLRIPAMEDTPPGAELFAFDAEEIERIVTEQVGSSALFAARFRECA
ARALLLPRRDPGRRTPLWQQRQRSAQLLDVARKHPDFPIILETVRECLQDVYDLPALRRL
HEHIAARRITVRELETPEPSPFAKTLLFGYVGQFLYNTDAPLAERRAAALSLDPSLLAQL
LGQEELRELLDAQIIERTEAQLQRLAPDRRLRGAEGLADLLRLLGPLSPEEAAARLRPEE
AAGAVAAGPGSASGRGLGADGAAEDAAGADDAAENETADLGVVAEWADRLVRAHRAFRVR
TGGIERIAAVEDAARLRDGLGVPLPMGVPAAFIEPVADPLGDLVSRYARTHGPFTTGQAA
AALGLGRAVVETVLRRLAADRRVATGRFLPAELLSARGLDPRDPGEEWCDAGVLRTLRRR
SLAALRAQIEPVDAATYARFLPAWQHVWARGAEQDPRVADEDGLLTVIDQLAGTAVPASA
LETLVLPARVRGYAPRMLDELLASGQVLWTGAGTVPGQDGWVSLHLAGSADLTVPERPAI
PLDRLSADARTVYAAMGDGADFLPRIAARAGLSLGAAGDGLWELVWAGLVTNDGMAALRA
FLDGGKTAHARPRGSARSRSLGRRGAGRISRAQGARPGRYAGLAAPGRAGAGLSSGGLGS
DGLGADGSGAGSDGGVGGWGLGVASGGPGGGAAEMSALSPQRERELSGRWSRVSSYLSEE
PLEPTVRAVALAQLMLDRYGVLTRGAVQQEDSPGGFAAVYQILTAQEDQGEARRGYFIEG
LGGAQFAAPATVDLLRAAEIDEQLEASGASERTPQVLVLAATDPAQPYGAALSWPDPIPG
ESLLRGVSGGSRGSGPEGAFAGGGAASGRDGAVSGPDGAASAGAKTSQARPGRKAGALVV
LVDGRPVLYVERGGKTLLAFTTRVLDLELAAPAVADAVRAGAAQKLVVEKVNGVSVLERG
APAEDGSPDPITALREALMAAGFDSTPKGLRIRR
NT seq 5505 nt   +upstreamnt  +downstreamnt
atgccgcacgccctggaccgcttcacgcccgcgacccgcgactggttcgccggggccttc
ggcgcgcccaccgccgcgcaggaaggggcgtgggaggccatcgcgcagggtcggcacgcg
ctcgtcgtcgcccccaccggctccggcaagaccctcgcggccttcctctgggccctggat
cggctgctgctgggcgggggcggcgcctcgggcgggggcgcggacgacgccgaagccgcg
acgcccgcacgtcacggcggggatgccgggcgcaccgggaagcgccggacgaacgccacc
caggtcctctacatctcgcccctgaaggccctcggggtggacgtggagcgcaacctgcgc
gccccgctggtcggcatcacccagaccgcgcgcttccagggcaccgagccgcgggagatc
tcggtgggggtgcgctccggggacacccccgccgccgagcgtcgggccctgctgtcgaac
ccgccggacatcctcatcaccaccccggaatccctctacctcatgctcacctcgaaggcg
cgctccagcctcacccaggtgcacaccgtgatcgtggacgaggtgcacgcggtggccggg
accaagcgcggggcccacctggccgtgaccctggagcgcctggaccagatcctgccctcc
cccgcccagcgcatcggcctgtccgccaccgtggagcccgtggagacggtcgcccgcttc
ctcggcggcacgacccccgtcaccgtggtgcgccccgaggccgccaagacctgggacctc
accgtctccgtgcccgtgccggacatgtccaacctgacggtgccggtgccgcgggagcag
ccgcgcgtgcgcaccggcatcgaccggggctccgccgccagcggcaccgcgaccctggag
gacgccctcggtctggacctcgcctccccgctggccgggcggcagaacgacgacgccgcc
gtcacgcccctgccgccggagccggtgcacgaggtggtcgcctccatctggccgcacgtg
gaggagcggatcgtggacctcgtggaggcgcaccgctccaccatcgtcttcgccaactcc
cgcggcctggccgagcgcctgacctcccggctcaacgaggtccacgccttccggcaggtc
cagcgcgggctgctggacccggagcagacccccggccgacgcggatcggccggggccggg
atccgggagcagcggatgggcgccggggaggcccgcgccgccgcgtcgtcgggcggggcg
tcgggcacagtttcggccgcggcgtcgggcgggcccgtacccgatgccgatgccgcagcc
gagatgccctacgcgccgccggccgtgaaccacctgaccagcggcaccgcggcgcccgag
ctggcccgcgcccaccacggctccgtgtccaaggaccagcgcgcgctgatcgaggacgcc
ctgaagaccggggcgctgcgctgcgtcgtcgcgacctcctccctggagctgggcatcgac
atgggcgcggtggacctggtgatccaggtggagtccccgccgagcgtggcctccgggctg
cagcgggtgggccgggccgggcaccaggtgggcgagacctcccgggccgtgctctacccc
aagcaccgcggggacctgcgcgacgccgccgtgaccgtggagcggatgcgcgccggggcc
atcgagaagctgcatgtgcccgccaaccccctggacgtgctcgcccagcagacggtggcc
accgcggcgctggggcccatcgacgtcgaggcctggttcgaggcgctgcggcgcaccgcg
cccttcgcggctctgccccgctccgccttcgacgccgtactggacctgctggccgggaag
tacccctcggatgagttcgccgagctgcgtccgcgcctgatctgggatcgcgacggcggg
gtcctggaaccgcgccccggggcccagcggatcgcggtgacctccggcggcaccatcccg
gaccgcggcctgtacccggtgttcatcgtcggcggggacgagcagaccgggcccaagcgg
gtgggcgagctggacgaggagatggtctatgagtcccgcgccggggacgtcatcgccctg
ggggccacgagctggcggatcgaggagatcacgcacgaccgggtcagcgtcacccccgcc
ccggggcaggtcggcaagctgccgttctggcacggagacgggcccgggcgcccggtggac
ctcggcgaggccgtgggcggattcacccgggagctggcctcccgcctggagacggggcag
gacgacgccgcccgcacgcgcctgcgcgaggccgggctggacgagtgggcggcggacaac
ctcctggcctacgtgcgggagcagaccgaggcgacggggcaggtgcccagcgagaagacc
ctggtggtggagcggttccgggacgagctcggggactggcgggtgatcctgcactcgccc
tacgggatgcccgtgcacgggccgtgggccctggccgtgggggcgcgcatcgagcagcgc
tggggcctggacggctccgcgatggccgccgacgacggcatcgtgctgcgcatccccgcg
atggaggacaccccgccgggggcggagctgttcgccttcgacgcggaggagatcgagcgg
atcgtgaccgagcaggtgggctcctccgcgctgttcgccgcccgcttccgcgagtgcgcc
gcgcgggccctgctgctgccccgccgggacccggggcggcgcacccccctgtggcagcag
cggcagcgctccgcgcagctgctggacgtcgcccggaagcacccggacttcccgatcatc
ctggagaccgtgcgcgaatgcctccaggacgtctatgacctgcccgccctgcgccggctg
cacgagcacatcgcggcccggcggatcacggtccgggagctggagaccccggagccctcc
cccttcgccaagaccctgctgttcgggtacgtcgggcagttcctctacaacacggacgcg
cccctggccgagcggcgggccgcggccctgtccctggacccctccctgctggcccagctg
ctggggcaggaggagctgcgggagctgctggacgcgcagatcatcgagcgcaccgaggcc
cagctgcagcgcctggccccggaccggcgcctgcgcggggcggagggattggcggacctg
ctgcgcctgttgggcccgctcagccccgaggaggccgcggcccggctgcgcccggaggag
gccgcgggggccgtcgccgcgggacccggctcggcgtcgggccgcggtctgggcgcggac
ggtgccgcggaggacgctgcgggcgcggacgacgccgcggagaacgagacggccgacctc
ggcgtcgtcgcggagtgggcggatcggctggtgcgggcccaccgggccttccgggtgcgc
accggcgggatcgagcggatcgcggccgtggaggacgccgcccgcctgcgcgacgggctg
ggggtgcccctgccgatgggggtgcccgcggccttcatcgaaccggtcgcggacccgctg
ggggatctggtctcccggtacgcccgcacccacgggcccttcaccaccgggcaggccgcg
gcggccctggggctggggcgggccgtcgtcgagacggtgctgcggcgcctggccgcggac
cggcgggtggcgaccgggcgcttcctgcccgccgagctgctgtcggcccgcggcctggac
ccgcgggatccgggcgaggaatggtgcgacgccggggtgctgcgcacgctgcgacgccgc
tccctggccgcgctgcgcgcgcagatcgagccggtggatgccgcgacctacgcccgcttc
ctgcccgcctggcagcacgtgtgggctcggggtgccgagcaggatccgcgggtcgcggat
gaggacgggctgctcacggtgatcgaccagctggccgggaccgcggtgcccgcctccgcc
ctggagaccctggtgctgccggcccgggtgcgcggctacgccccgcggatgctggatgag
ctgctggcctcggggcaggtgctgtggaccggggccgggaccgtgcccgggcaggacggc
tgggtgagtctgcacctggccggatccgcggatctgaccgtgccggagcggccggcgatc
ccgctggatcggctgagcgcggacgcacgcaccgtgtacgcggcgatgggcgacggggcg
gatttcctgccgcggatcgccgcccgcgcggggctgtccctcggggccgccggggatggg
ctgtgggagctggtgtgggctggtctggtgaccaacgacgggatggccgcgctgcgagct
ttcctcgatggcggaaagacggcgcacgcccgaccccggggctcggcccgctcccggtcc
ctgggtcgacgcggggccgggcggatctcgcgggcacagggggcgcgtcctgggcggtat
gcggggctggcggctcccggtcgggccggtgccggtctcagctccggtgggctgggttct
gatgggctgggggccgacgggtcaggtgccgggtccgacggcggcgtcggcggctggggt
ctcggcgtggctagcggtggtcccggcggcggcgcggctgagatgtccgcgctgagtccg
cagcgggagcgggagctgtccgggcggtggtcccgggtgagctcgtacctgtccgaggag
cccctggagccgacggtgcgcgccgtcgccctggcgcagctgatgctggaccggtacggg
gtgctgacccgaggcgcggtgcagcaggaggattccccgggcggcttcgcggcggtgtac
cagatcctcacggcccaggaggatcagggcgaggcccgccgcggctacttcatcgagggg
ctgggcggcgcgcagttcgccgccccggccaccgtggatctgctgcgcgcggcggagatc
gacgagcagctggaggcctccggcgcctccgagcgcactccgcaggtgctggtgctggcc
gccacggatcccgcccagccgtacggtgcggcgctgtcctggccggatccgatccccggg
gagtcgctgctgcgcggggtgagcggcgggagccgggggtcgggtcctgagggcgccttt
gccgggggcggcgcggcgtcggggcgggacggcgcggtctcggggccggacggcgcggcg
tcggcgggggcgaagacgtcccaggcgcgcccgggccggaaggccggggccctggtggtg
ctggtggacggccgcccggtgctgtacgtggagcgcggcggcaagaccctgctggccttc
accactcgcgtactcgacctggagctggccgcacccgcggtggccgacgccgtgcgggcc
ggggccgcgcagaagctggtggtggagaaggtcaacggcgtctccgtgctggagcgcggc
gccccggccgaggacggctcccccgaccccatcaccgcgctgcgcgaggccctgatggcc
gcgggcttcgactcgacaccgaagggcctgcggatccggcggtga

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