Rothia kristinae: I6G21_09780
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Entry
I6G21_09780 CDS
T06977
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
rkr
Rothia kristinae
Pathway
rkr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G21_09780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkr03019
]
I6G21_09780
03009 Ribosome biogenesis [BR:
rkr03009
]
I6G21_09780
Enzymes [BR:
rkr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
I6G21_09780
Messenger RNA biogenesis [BR:
rkr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I6G21_09780
Ribosome biogenesis [BR:
rkr03009
]
Prokaryotic type
rRNA processing factors
I6G21_09780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
QPT53527
UniProt:
A0A7T3CG39
LinkDB
All DBs
Position
complement(2218258..2221416)
Genome browser
AA seq
1052 aa
AA seq
DB search
MSTQNDGAAPRGEDAETAPAASSVPEVAADPFGATSVLFKAPDIEELKAAALAKKQQEKA
ELEAAEDEPQDDGEVVARKRRRRRRGDTDLELVDEEEDPNTVTKVRTPRIVESTSADAVT
SVKGSTRLEAKRQRRRESRASGRRRHGITEAEFLARRESVDRQMIVRQKDERIQIGVLED
GVLAEHFVSQTQQDSLIGNVYLGKVQNVLPSMEAAFIDIGRGRNAVLYAGEVNWDAAGLD
GAPRRIERALKSGDSVLVQVTKDPIGHKGPRLTSQISLPGRFLVYVPGGSMTGISRKLPD
TERARLKKILKDHLPDGAGVIVRTAAEGASEEDLAHDINRLRVQWEEIQKKANSRKTTAP
ELLSQEPDLSIKTVRDVFNEDFSAMVVQGQEAWDSIEAYVTYMAPDLVGRLRQWTEEEDV
FDHYRIEEGLAKALDRKVFLPSGGSLVIDRTEAMTVIDVNTGKFTGSGGNLEETVTKNNL
EAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRDLVLRRLVECLGRDRTKHQVAEVTSLGL
VQMTRKRMGTGLLEVFSEPCEACDGRGVVVHDEPLKGRSGGHGSETHHRHDRHDRKRSRN
RQQREETPRNPQDDARAEAARTAFATIAAASSKHEDDAEDQERTQQAASSGDSVEQHDGA
GQESKAAKKRKRRKRGGRSRGEQAETQQGESSQNGSQAQGETAHAADGRDEAGSGHGLPE
DPDMVVTIHGEVVSLPHGEERQPDQERERSERSLDLDSLSEAFERRAPREEAGRGESGTE
DSRRSETSRGHSRRGRDRDDSASSAGEETGLPAPRRAGSTRSARAGRTRREDSRRAGREA
ADAARQAALEALEDMKPGRRSRRSEQTERGGQSGAENSGSATSGTGKSDAGQSGSAQERG
GRTRGEDRQEQGRRSGTSRTPRRAQSPARTAQDPAEQRPTVTGVATPGASRRSEQPDQAQ
ESAQAALAAPAQEERARPASASRPKRRSRRASSDGGQGGSIVAGQQGEASGVRVATAAAA
PSTDGTTAAAAQAEEVMMLGVGVKAEDIRRPE
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccagaacgacggcgccgccccccggggcgaggacgccgagaccgcacccgcc
gcctcctccgtcccggaggtcgccgccgacccgttcggcgcgacctccgtgctgttcaag
gccccggacatcgaggagctgaaggccgcggccctggcgaagaagcagcaggagaaggcc
gagctcgaggccgccgaggacgagccgcaggacgacggcgaggtcgttgcccgcaagcgc
cgtcggcggcgccgcggagacacggacctggagctggtggacgaggaggaggaccccaac
accgtcaccaaggtccgcaccccgcgcatcgtcgagtccacctcggccgacgccgtgacc
tccgtgaagggctccacgcgcctggaggccaagcgccagcgccgtcgggaatcccgcgcc
tccgggcgccgtcggcacggaatcaccgaggccgagttcctggctcgtcgggagtccgtg
gaccggcagatgatcgtgcgccagaaggacgagcgcatccagatcggcgtcctggaggac
ggggtgctggccgagcacttcgtgtcccagacccagcaggactccctgatcggcaacgtc
tacctcgggaaggtgcagaacgtgctgccctccatggaggcggcgttcatcgacatcggc
cgcgggcgcaacgcggtgctctacgccggtgaggtcaactgggacgccgcgggcctggac
ggcgcgccccggcgcatcgagcgggccctgaagtccggggactccgtgttggtgcaggtc
accaaggatccgatcgggcacaagggcccccggctgacctcgcagatctccctgcccggg
cgcttcctcgtctacgtccccggcgggtccatgaccgggatctcccggaagctgccggac
acggagcgggcccggctgaagaagatcctcaaggaccacctgcccgacggcgccggcgtc
atcgtgcgcaccgccgcggagggcgccagcgaggaggacctcgcccacgacatcaaccga
ctgcgggtgcagtgggaggagatccagaagaaggcgaactcccgcaagaccaccgccccg
gagctgctgtcccaggagccggacctgtccatcaagaccgtgcgcgacgtgttcaacgag
gacttctccgcgatggtcgtgcagggtcaggaggcctgggactccatcgaggcgtacgtg
acctacatggccccggatctggtgggacggctgcggcagtggaccgaggaggaggacgtc
ttcgaccactaccggatcgaggagggcctggccaaggccctggatcgcaaggtgttcctg
ccctccggcggctccctggtcatcgaccgcaccgaggcgatgaccgtgatcgacgtgaac
accggcaagttcaccggctccgggggcaacctggaggagaccgtcaccaagaacaacctg
gaggccgccgaggagatcgtgcgccagctgcgcctgcgcgacatcggcgggatcatcgtc
gtcgacttcatcgacatggtcctggagtccaaccgggacctggtgctgcggcgtctggtg
gagtgcctcgggcgggaccgcaccaagcaccaggtggccgaggtgacctcgctgggtctg
gtgcagatgacccgcaagcgcatgggcaccggtctgctggaggtcttctccgagccctgc
gaggcctgcgacggccgcggcgtcgtcgtgcacgacgagccgctgaagggccgctcgggc
ggtcacggctccgagacccaccaccgccatgaccggcacgaccgcaagcggtcccgcaac
cgccagcagcgcgaggagaccccccgcaacccgcaggacgacgcgcgcgccgaggccgcc
cgcacggccttcgcgaccatcgccgcggcctcctccaaacacgaggacgacgcagaggac
caggagcgcacccagcaggcggcgtcttccggggactcggtcgagcagcacgacggcgcg
ggacaggagtccaaggccgccaagaagcgcaagcgccgcaagcgcggcggacgctcccgg
ggcgagcaggccgagacgcagcagggcgagtcctcgcagaacgggtcccaggcccagggc
gagacggcccacgccgcggatggacgcgacgaggctggctccggccacggtctgccggag
gacccggacatggtcgtgaccatccacggtgaggtcgtctccctgccccacggcgaggag
cggcagccggaccaggagcgggagcgctccgagcggtccctggacctggattcgctgagc
gaggccttcgagcgccgggcgccccgggaagaggccgggcgcggagagtccggaaccgag
gactcccgccgcagcgagacgtcccgcggtcactcccgccggggacgggaccgggacgac
tccgcctcgtcggcgggggaggagaccgggctgcccgccccgcgccgggccgggagcacc
cgctccgcacgcgccgggcgcacgcgccgggaggacagccgccgggccggacgcgaggcc
gccgacgccgcgcgccaggccgcactcgaggccctcgaggacatgaagcccggccggcgc
tcgcgccgctcggagcagaccgagcgcggcggacagtccggcgcagagaactccggctcc
gcgacgtccggcaccgggaagtccgacgccgggcagtccggttccgctcaggagcggggc
gggcgcacccggggcgaggaccggcaggagcagggccgccggtccgggacctcccgcacc
ccccggcgggcccagtccccggcgcggaccgcgcaggacccggccgagcagcggcccacg
gtcaccggagtcgccaccccgggcgcctcgcgccgctccgagcagccggatcaggcccag
gagtccgcccaggccgcactagctgccccggcgcaggaggagcgggcccggccggcctcc
gcctcccgccccaagcgccgttcccgtcgggccagctccgacggcgggcagggcgggagc
atcgtcgccggtcagcagggcgaggcctcgggggtccgggtcgccacggccgcggccgcc
cccagcaccgacggcaccaccgccgcggccgcacaggccgaggaggtcatgatgctcggc
gtcggcgtgaaggccgaggacatccgccggcccgagtga
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