Candidatus Rickettsia kotlanii: FLA4_01100
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Entry
FLA4_01100 CDS
T09157
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rkt
Candidatus Rickettsia kotlanii
Pathway
rkt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rkt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FLA4_01100 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rkt03400
]
FLA4_01100 (mutM)
Enzymes [BR:
rkt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FLA4_01100 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FLA4_01100 (mutM)
DNA repair and recombination proteins [BR:
rkt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FLA4_01100 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
HTTM
IBR_1
Motif
Other DBs
NCBI-ProteinID:
BDU59700
LinkDB
All DBs
Position
99709..100530
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AA seq
273 aa
AA seq
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MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL
IIDFNNDYSLIVHLGMSGRFTLQSVNYKTQKHDHVIFDLSNGEKLIFNDTRRFGMIYSFK
TNLLEKEFFNDLGIEPFSDLLTLDSLKNKLQTKKIPIKNLIMDNRVIVGVGNIYASESLH
LARIHPDKSGSDLRDDEIENLIKSIRDVLTKAITAGGTTIKDFVNGDNKPGYFTQQLMVY
GREGQSCLSCSSTIIKTKHSGRSTFYCKICQYS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttcctgaagtagaaactcttaaaaactctctaaaagataagctaatcggg
cttattatagaaaatgtagagttaaaaagagataatttacgttataagctatccccgctt
ttagctacagaaatcttaaatactaatatactggatgttaggcgtcgtgcaaaatattta
attatagattttaataatgattattctttaatagttcatctaggcatgagcggtagattt
actctgcaatctgttaattataaaactcaaaaacatgatcatgtgatttttgatttaagt
aacggcgaaaagttaattttcaacgatactagacgattcggtatgatttatagttttaag
actaatctcttagaaaaagaattttttaatgatttaggcatagaacctttttctgattta
ttgacgttagactctctaaaaaataagctacaaactaaaaaaataccaataaaaaacttg
attatggataatagagttatagtcggagtcggtaatatctatgcttccgaaagtcttcat
ttagctagaattcatccggataaatcaggtagcgatttaagggatgatgaaatagaaaat
ttaattaaatcgattagagatgtgttaactaaagctataactgccggcggtactactatt
aaagattttgtaaacggcgataacaaacctggttattttactcagcaacttatggtttac
ggtagagagggacaaagttgtttaagctgctctagcactattatcaagacaaagcattca
ggcagaagtactttttattgtaaaatttgccaatatagttaa
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