Candidatus Rickettsia kotlanii: FLA4_10420
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Entry
FLA4_10420 CDS
T09157
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rkt
Candidatus Rickettsia kotlanii
Pathway
rkt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rkt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FLA4_10420 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkt03019
]
FLA4_10420 (pnp)
03016 Transfer RNA biogenesis [BR:
rkt03016
]
FLA4_10420 (pnp)
Enzymes [BR:
rkt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FLA4_10420 (pnp)
Messenger RNA biogenesis [BR:
rkt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FLA4_10420 (pnp)
Transfer RNA biogenesis [BR:
rkt03016
]
Prokaryotic type
tRNA degradation factors
FLA4_10420 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
KH_DUF2096_C
KH_2
Motif
Other DBs
NCBI-ProteinID:
BDU60632
LinkDB
All DBs
Position
complement(1008083..1010329)
Genome browser
AA seq
748 aa
AA seq
DB search
MFNEITKSVTWNGKVLELSTGKIARQVNGAVTVKMGNSVLLCMAVVANKAKEGIGFFPLT
INYREMAYAAGKIPGGFFKHERKPSDREVLVSRLIDRPIRPLFHPAFVNETHVTCSVLSY
DPETPVDILAIIGASAALSLSPAPYLKIVAASKVGLINGEFVLNPTLELLKTSQLDLVVA
GTSDSVMMVESEAHLLSEEQMLEAVKFGFKSFQPVIKIIKELAEEAKKPKLEMQDLYPAS
LKKEIEKLFVKEIEQAFAIKSKQERNTNLDLITEKVLTHFVSDIENKKYSNYQIESALKA
IESDILRNEILEKNRRIDGRSTTDIRQIACEIGLLPSAHGSALFTRGETQSLVSTTFGTS
LDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLAWRAINPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMYAGVPIKAPVAGIAMGLVKEGKKFAVLS
DILGDEDYFGDMDFKVAGTSEGITALQMDIKISGVDFKIMQVALEQARLGRLHILEQMNK
VISKPNNELSKNAPSTTTIKIDKDKIRDIIGPGGKVIKEICETSGAKIDISDDGTVSIYA
SDRDKLKVALDKIKAIAVEPEIGEIFNGTVMKVLDSGAFINYLGNKDGFVHISEISEERI
ETVSGILKQGDIVKVKLIGFDNKGKAKLTIKNVDKDKSSNNTKPKTNVNNAKGNSEPEQR
CDFSKKRAWNEDNNAETAEVITERKYFN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgaaataactaagagtgttacatggaacgggaaagttcttgagcttagtaca
ggtaaaatagcaaggcaagttaacggggcagttacggtcaaaatgggtaattccgtttta
ttatgtatggcagtagtagctaacaaagcaaaagagggcataggttttttccctttaaca
attaattatagagaaatggcatatgctgccggtaagataccagggggattttttaaacat
gagaggaaaccatcagatagagaagttttagtatctcgtttaatagatagaccgattaga
ccattatttcatccggcttttgtgaatgaaacgcatgtaacttgcagtgttctttcatat
gatcctgaaactccggtagatatacttgcaattatcggtgcatcggctgcacttagccta
tcccctgctccttatctaaaaatagttgcggcaagtaaagtaggtttaattaatggtgaa
tttgttttaaacccgacacttgaattattaaaaacaagtcagcttgatttagtagttgca
ggaacatcagattcagtaatgatggttgaatcggaagctcatttactctctgaagaacaa
atgttagaagccgtaaaatttggatttaaaagctttcagccggtaatcaagataatcaaa
gaactagcagaagaagctaaaaaaccaaaacttgaaatgcaagatttatatcctgcttca
ttaaagaaagaaattgagaagttatttgtaaaagaaattgaacaagcttttgcaattaaa
tctaaacaagaacgtaacactaatttagatttaataactgaaaaagttcttacacatttt
gtaagcgacatagaaaataaaaaatatagtaattatcaaattgaatcagctttaaaagct
attgaatcagatatattacgtaacgagattttagaaaaaaatagacgtatcgatggaaga
agtaccacggatataagacaaattgcttgtgaaataggtttactaccttccgcacatggt
tcagctttatttactagaggtgaaacgcaaagcttagttagtactacattcggtactagt
ttagatgagcagatagttgacagtttagagggtgagtataaagagcgttttatgctcaat
tatatctttccaccctactctgtaaatgaagcaatgccgatgaaagcacctagtcgtcgt
gaagtcggacacggtaaactcgcatggcgtgctattaatccaatattacctaataaagta
caatttccttattctattagagtagttgccgaaactacggaatctaacggttcttcttca
atggcaactgtttgcggtagttctcttgctttaatgtatgccggtgtaccgataaaagca
ccggttgcgggtattgctatgggacttgttaaggaaggcaaaaaatttgctgtattatcc
gatattctcggcgatgaagattatttcggtgatatggactttaaggttgcaggaaccagc
gaagggattactgcattacaaatggatatcaaaatatccggagtagattttaaaataatg
caagtagctttagagcaagcacgactcggtcgtttgcatatactggagcaaatgaataaa
gttatcagtaaaccaaataatgaactaagtaaaaatgctccttctactactactataaaa
atagataaggataaaattagagatattataggaccgggcggtaaagtaataaaggaaatt
tgcgaaactagtggtgctaaaatagatataagtgatgacggtacggtgtctatttatgct
tcagatagagataagctaaaagttgccttagataaaattaaagctattgccgttgaacct
gaaatcggtgaaatatttaacggtacggtaatgaaagtcttagattccggtgcttttatc
aattatttaggtaataaagacggctttgttcatattagtgaaatttcagaagaaagaata
gaaacggttagcggtattttaaaacaaggcgatatagtaaaagttaagctaataggcttt
gataataaaggcaaagcaaaattaactattaaaaatgtcgataaagataaatcttcaaat
aataccaagccaaaaactaatgttaataatgctaagggtaattcagaacctgagcagcga
tgtgattttagtaaaaaacgagcttggaatgaagataataatgctgaaactgctgaagta
attacagaacgtaagtattttaattga
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