Candidatus Rickettsia kotlanii: FLA4_12200
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Entry
FLA4_12200 CDS
T09157
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rkt
Candidatus Rickettsia kotlanii
Brite
KEGG Orthology (KO) [BR:
rkt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rkt03032
]
FLA4_12200 (gyrB)
03400 DNA repair and recombination proteins [BR:
rkt03400
]
FLA4_12200 (gyrB)
Enzymes [BR:
rkt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FLA4_12200 (gyrB)
DNA replication proteins [BR:
rkt03032
]
Prokaryotic type
DNA Topoisomerases
FLA4_12200 (gyrB)
DNA repair and recombination proteins [BR:
rkt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FLA4_12200 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
GyrB_insert
Motif
Other DBs
NCBI-ProteinID:
BDU60810
LinkDB
All DBs
Position
complement(1174829..1177237)
Genome browser
AA seq
802 aa
AA seq
DB search
MSEIEEKFNASSYGADSIKVLKGLEAVRKRPGMYIGDVGDGSGLHHMIYEVVDNAIDESL
AGYCDLVRVTLNKNGSVTVSDNGRGIPVEIHEGEGISAAEVIMTQLHAGGKFDQNTYKVA
GGLHGVGVSVVNALSEWLELRIWRNNKEYLIRFNNGITEAPLAVVKENIDKKGTEVTFFP
SVETFTNIEFDFGTIEHRLRELAFLNSGVKILLVDNRFEEVKEVEFYYTGGIEAYVKYID
RAKHAIHPCIVVNTENAESGISLELAMHWNDSYHENILCFTNNIRQRDGGTHLSAFKSAI
TRVITSYLDKKAKNDFSGEDTREGLCCVLSVKVPDPKFSSQTKDKLVSSEVRPVVENTVY
TKVLEWFEEHPAEAKAIIAKIMEAANAREAARKAREFTRRKSALEVSNLPGKLADCHAKD
PTISELFIVEGDSAGGTAKQGRDSKIQAILPLRGKILNVERARFDKMLSSDQIGTLITAL
GISVEREFSLEKLRYHKVIIMTDADVDGSHIRTLLLTFFYRHMPELINKGYLYIAQPPLY
KVKKGAAELYLKNEQALQDYLITSTINDATLILDGKEQLVGDNLEELINKVVKFNGLLDH
ASKKFNCSITEILAINDLLNNKIFEPESDLRLKKALDVLNSLGDSPGKTNWEVLKHENKI
EFFRFSRGLKKSEILLKEQLESFEFVQISKLALTIFDIFSKPLKLIVKSQEFDILTPSQL
LNTIIECGKRGINIQRFKGLGEMNSDQLWETTLDPTKRTLLQVRVAEIDEAEGIFSTLMG
DVVEPRRLFIQANALNVVNLDV
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaattgaagaaaaatttaacgcatcatcatacggtgctgattccataaaggtt
ttaaaaggtcttgaagccgtaagaaaaagaccaggaatgtatatcggggatgtcggagac
gggtcgggtctacatcatatgatttatgaagtagtcgataacgctatcgatgagtcactt
gccggttattgtgatctagtacgagtaacattaaataaaaatggttcagtaaccgtatcc
gataatgggcgaggtatacccgttgaaattcatgaaggagaaggaatatcggcagctgaa
gttattatgacgcaacttcacgccggcggtaagtttgaccagaacacttataaggttgca
ggtggtctacacggtgttggtgtatcggttgtaaatgctctttctgaatggcttgagcta
cgtatttggcgtaataataaggaatatttgattagatttaataacggtataacggaagct
ccacttgcggttgtcaaagaaaatattgataaaaaaggtacagaagttactttttttccg
tctgtagaaacgtttactaatatagaatttgatttcggcactatagagcatcgtcttcgt
gaacttgcttttttaaattcaggcgtaaagattttactcgtcgataatcgctttgaagaa
gttaaagaagtagagttttattatacaggcggtatagaagcttatgtaaaatatatagac
agagcgaagcacgctattcatccatgtatagtagttaatacggagaatgctgagtccggt
ataagccttgagcttgcgatgcattggaacgattcttatcatgaaaatattttatgcttt
actaataatattaggcagcgtgatggcggaactcatcttagtgctttcaaatcagcgata
acacgtgttattacctcgtatcttgataaaaaagctaaaaatgactttagtggtgaagat
actagggaagggctatgttgtgtgctttccgttaaagtgcctgatcctaaattttcttct
caaacaaaagataagctagtaagctccgaagtacgaccggttgttgagaataccgtttat
acaaaggtgcttgagtggtttgaagagcatccagcagaagctaaggcaattatagctaag
attatggaagctgcgaatgctcgtgaagctgctagaaaagcaagggaattcactcgaaga
aaatcagctttagaagtttcgaatttaccaggtaaacttgcagattgccatgcaaaagat
cctactatttcagaattgtttattgttgagggggactctgcgggcggtactgcaaagcag
ggtagggatagcaaaattcaggctatattgcctttgcgtggtaaaattttgaacgttgag
cgtgcaagatttgataaaatgctcagttcggaccaaatcggtacgttaattacagctctt
ggaattagtgttgaacgagaattttccctagaaaagcttagataccataaagttattatt
atgaccgatgctgatgttgacggttcgcacattagaactttattactcacgtttttctat
cgtcatatgcctgagctaataaataaaggctatctatatatagctcagccaccgctttat
aaagtaaagaaaggagcagccgagctttatttaaagaatgagcaagctctgcaagattat
ttgatcacatcaactattaatgatgcaaccttaattctagatggtaaagagcagttagtg
ggtgataatttagaagagttaattaataaagtagttaagtttaacggcttgcttgaccat
gctagcaaaaaatttaattgctcaattactgaaattcttgcgattaatgacttacttaat
aacaaaatatttgagcctgaaagtgatttaagacttaaaaaagctttagatgttttaaat
agcttaggagattcgcctggtaagactaattgggaagttttaaaacatgaaaataaaata
gagttcttccgctttagtaggggtttaaaaaaaagtgaaatattattgaaagagcagtta
gaatcatttgagtttgtacaaatatcaaagcttgctttaacgatttttgatatatttagt
aagccattaaagcttatagtgaaaagtcaggaattcgatattttaacaccgagtcagttg
ttaaataccattatagaatgcgggaaaagaggtataaatattcagcgttttaagggtctt
ggtgagatgaattctgaccagctatgggaaactactcttgaccctacaaaaagaactttg
cttcaggtaagagtcgcagaaattgatgaagcagaaggcattttctctactttaatgggt
gacgttgttgaacctcgcaggttatttatccaagcgaatgcgttgaatgtcgtgaatttg
gatgtataa
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