Rhodoluna lacicola: Rhola_00001290
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Entry
Rhola_00001290 CDS
T03203
Name
(GenBank) ATPases of the AAA+ class
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rla
Rhodoluna lacicola
Brite
KEGG Orthology (KO) [BR:
rla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Rhola_00001290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rla03019
]
Rhola_00001290
03009 Ribosome biogenesis [BR:
rla03009
]
Rhola_00001290
04131 Membrane trafficking [BR:
rla04131
]
Rhola_00001290
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rla04147
]
Rhola_00001290
Messenger RNA biogenesis [BR:
rla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Rhola_00001290
Ribosome biogenesis [BR:
rla03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Rhola_00001290
Membrane trafficking [BR:
rla04131
]
SNARE
SNARE associated proteins
Others
Rhola_00001290
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Rhola_00001290
Exosome [BR:
rla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Rhola_00001290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
Acetyltransf_7
AAA_lid_3
FR47
Acetyltransf_10
AAA_22
AAA_28
AAA_5
RuvB_N
SKI
AAA_16
AAA_2
AAA_18
AAA_14
AAA_17
AAA_24
AAA_33
ATPase_2
TsaE
RNA_helicase
nSTAND3
ABC_tran
NACHT
Cytidylate_kin
IstB_IS21
Mg_chelatase
TIP49
AAA_19
AAA_30
Acetyltransf_9
NPHP3_N
Zeta_toxin
AAA_11
AAA_25
NTPase_1
DUF5906
KTI12
Motif
Other DBs
NCBI-ProteinID:
AIC46959
UniProt:
A0A060JL02
LinkDB
All DBs
Position
complement(132003..133286)
Genome browser
AA seq
427 aa
AA seq
DB search
MSIRFRNFQPVDTDALLALWDEARNAGFEPVYSLAEVLASCTKDFAIVACDGDLVIGTAV
GRAAHEQGWVVLLTVAQSHQGQGLGGRLLGELEIEMSKAGITKMSMLVADDGKSGVLEKA
GFQALKHLNYFERPVSVSEQEREVLKNLGGALMPRNLWGKIAGMKNEKELLERRLVLPLS
DAALAETFGVEPPKAIVLFGPPGTGKTTFAKAVASRLNWPFVEVFPSRLAGDQNGLAGGL
REIFNSIDDLENVVVFIDEVEEIASKRKGDPPSPTQGVTNELLKLIPTFREKPGHLLIVA
TNYIRALDDAFLRHGRFDYVIPIGLPDAEARHSIWSRYIPALALESIDVAELVKRSEGFS
PADIEYAARKASQRALEQAIYETQVATKENSTTATEHYLWAISNTRRTVSDEVIAEFEQD
IQSIGRL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcagattccgcaatttccagccagtagacaccgatgccctgctcgccctctgg
gacgaagcgcgaaacgcaggttttgaaccggtttactcactggctgaagtacttgcgtcg
tgcaccaaagactttgcaattgttgcctgcgatggcgatctagttattggcaccgccgtg
ggccgcgctgcacacgaacagggctgggttgtcttgctaaccgttgcccaatcacatcag
gggcaaggtttgggcggacgcctattgggtgaacttgaaattgagatgtctaaggccggc
attaccaagatgtccatgctggttgccgatgacggcaagagtggcgtcctagaaaaagct
ggcttccaagctctgaagcacctgaactattttgaacgcccggtatcggtgagtgagcag
gagcgcgaggtgctcaaaaatcttggcggtgcactgatgccaagaaacctctggggcaaa
atcgccggcatgaaaaatgaaaaagaattgttggagcgccgactggtgctaccactttca
gatgccgcactggccgagacattcggagtcgaaccgccaaaggcgattgttttgtttggt
ccgcctggaaccggtaaaaccacattcgctaaagcggtggcatcaagactcaactggcca
tttgttgaagtctttccctcaagactcgcgggagatcagaacggattagccggcgggctt
cgcgaaatctttaactcgattgatgatctagagaacgttgtggttttcattgacgaggtt
gaagaaattgcctcaaagcgaaaaggtgacccaccgtcaccaacccagggcgtcaccaac
gaactgctgaagttaattccaaccttccgcgaaaagccagggcacctacttattgtggct
actaattacattcgcgcacttgacgatgctttccttcgccacggacgttttgattacgtt
attcctatcggtttgccagatgccgaggcacgtcactcaatttggtcacgctacattcca
gcactggcacttgaaagtattgatgttgcagaactggtaaagcgcagtgagggtttttca
cccgccgacatcgagtacgccgcacgcaaagcatcgcagcgagcacttgagcaagcaatt
tacgaaacccaggtggcaaccaaagaaaattccaccacagctacagagcattacctttgg
gctatcagcaacactcgccgcaccgtaagcgacgaggtaatcgccgagttcgaacaagat
attcaaagcatcggccgactctaa
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