Rhodoluna lacicola: Rhola_00005460
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Entry
Rhola_00005460 CDS
T03203
Name
(GenBank) Oligoribonuclease (3'->5' exoribonuclease)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rla
Rhodoluna lacicola
Pathway
rla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Rhola_00005460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rla03019
]
Rhola_00005460
03009 Ribosome biogenesis [BR:
rla03009
]
Rhola_00005460
Messenger RNA biogenesis [BR:
rla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Rhola_00005460
Ribosome biogenesis [BR:
rla03009
]
Eukaryotic type
Pre-60S particles
RNases
Rhola_00005460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AIC47361
UniProt:
A0A060JBV5
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All DBs
Position
complement(558417..559064)
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AA seq
215 aa
AA seq
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MVIVTDLPYFWIVIEISENLVWIDCEMTGLNPESDCLVEVAVVITNSELEILDAGLDVVI
KPRPDSWANMNDFVRNMHTESGLINEVDNGLDLAEAEELILNYIKRFVPNAKEAPLAGNT
IGTDRMFINRYMPKLDQHLHYRNIDVSSIKELSRRWYPRVYFQMPKKDGGHRALADILES
IHELRYYRQTVMVPAPGPTTEQAKAAAESLSKNNS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtggtaattgtcacggacctcccctatttttggattgtgattgaaatttcagaaaatcta
gtctggatcgactgcgaaatgacaggactcaaccctgagtcagattgcctagtagaagtt
gcggtcgtaatcaccaattccgagcttgaaattttagacgctggtcttgacgtcgtgatt
aaacctcgccctgattcctgggcaaacatgaatgatttcgttagaaacatgcacaccgag
tcaggcctcatcaacgaagttgataacggccttgatctagccgaggcagaagagctaatt
ctgaattacattaagcgattcgtaccaaatgcaaaagaggcaccactggcgggaaacacc
atcggaacagatcgaatgtttatcaaccgatacatgccgaaattagaccagcatctgcac
tacagaaacattgatgtgagctcaatcaaagaactgtccagacgctggtacccaagggtt
tatttccaaatgcccaaaaaagatggcggtcaccgagcgttggcagacatccttgagtca
attcacgagttgcgctactaccgccagacggtgatggttccggccccgggcccaaccacc
gaacaggccaaggctgcggccgaaagcctctcaaaaaacaattcctag
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