Rhodoluna lacicola: Rhola_00006810
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Entry
Rhola_00006810 CDS
T03203
Name
(GenBank) RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
rla
Rhodoluna lacicola
Brite
KEGG Orthology (KO) [BR:
rla00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Rhola_00006810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rla03021
]
Rhola_00006810
Transcription machinery [BR:
rla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rhola_00006810
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_20
TFIIA
Motif
Other DBs
NCBI-ProteinID:
AIC47488
UniProt:
A0A060JLL5
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All DBs
Position
691153..692946
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AA seq
597 aa
AA seq
DB search
MGLSNARNGMHRFGGGIERYQVAKKDSQTGKKRGGLLSSLLRSATDKSSSTKKTKAKETP
VISASTSKSAAKTTKPAAKPATKTAAKAPVKAAAKPAVKAASKTVAKAAPKKSAKPVAKV
TAKAKTAAKAAAKPAAKTSAKAPAKASVKASAKPAAKAALKPAKPAVKKGEKTTGKTAAK
PEAKAALKSTTKPAAKGKAAAVPASKAKPAKSSKLPKELAEDEDEIDDEADLESVDEIVA
EAAAVVDISAVEEELPEEEPEEDKAKNEIAKIGGMVLSNREEDDIPAQTTTITGATADPV
KDYLKQIGKVALLNAELEVELAKRIEAGLFAEEKLATDKKISRDVERDLKWVVKDGQRAK
SHLLEANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIR
QAITRAMADQARTIRIPVHMVEVINKLARVQRQLLQDLGREPTPEELARELDMTPEKVVE
VQKYGREPISLSTPLGEDGDSEFGDLIEDTEAVVPADAVGFTMLQRELERILDSLHPREA
GVIRSRFGLGDGVQKTLDQIGEEFGVTRERIRQIESKTMSKLRHPSRSQMLRDYLEN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttagtaatgcccgaaacggtatgcaccgattcggtgggggcatcgagaggtat
caagtggcaaagaaggattctcaaaccggtaagaagcgtggcggcttgctttccagtctt
ttgcgttctgccacagataaaagctcatcgacaaagaaaactaaagctaaggaaaccccc
gtcatcagcgcttcaaccagtaaatcagcggcaaagacaacaaagccagctgccaagcca
gcaacaaagactgcagctaaagccccagtgaaagccgcagcaaagcctgctgtcaaagcg
gcttcgaagacggtagccaaagctgccccaaaaaaatccgccaagccggttgcgaaggta
actgccaaggcaaaaaccgctgccaaggccgcagcaaagccagctgccaagaccagtgct
aaggctcctgccaaagcatcagtcaaggcgtcagctaagccagccgcaaaagccgcgcta
aaacctgctaaaccagcagtaaaaaaaggtgaaaagaccaccggtaagactgccgccaag
cctgaggccaaggcggcgctaaaaagtaccaccaaaccggccgctaaaggtaaggctgca
gccgttccggcctcaaaggctaagccggcaaagtccagtaaattgcctaaggaattagct
gaagacgaagatgaaatcgacgatgaggccgacctggaatcggttgatgaaatcgtcgct
gaggctgccgcggtcgtagacatttcagcggttgaggaagaacttccagaggaagagcct
gaagaagacaaagccaagaatgagatcgcaaaaatcggtggaatggttctttccaaccgt
gaagaagacgacattcctgcccagaccacaactattaccggtgcaactgctgacccggtt
aaggactacctaaagcaaattggtaaagtcgctctgctcaatgccgagctagaggttgag
ttggccaagcgcattgaggccgggctatttgcagaagaaaaacttgccaccgataaaaag
atttctcgcgacgttgagcgcgatctcaagtgggtagttaaggacggccagcgagccaag
agtcacctgctagaggcaaacttgcgtttggttgtaagccttgcgaagcgctataccggt
cgaggaatgcagttcctggatctgatccaagagggaaatctgggtcttattcgagccgtt
gagaaatttgactacacaaagggttacaagttctctacatatgcaacctggtggattcgc
caggcaatcactcgcgctatggcagatcaggctagaactatccgtattccggttcacatg
gttgaagtcatcaacaaactagcccgagttcaacgtcaattgcttcaggaccttggccgc
gaaccaaccccagaggaactagctcgcgaactggacatgacccctgaaaaggttgttgaa
gtacagaagtacggtcgtgaaccaatttctctttccactcctcttggcgaggatggcgac
agcgagtttggtgaccttatcgaagacaccgaagcggttgttccagccgacgctgttggt
ttcacgatgcttcagcgtgaacttgaaagaattcttgattcactgcacccgcgtgaggct
ggagttattcgctcacgctttggccttggtgacggtgttcaaaagacccttgatcaaatc
ggcgaagaattcggtgtcacccgcgagcgtatccgtcagatcgagtcaaaaaccatgtca
aaacttcgtcacccgtctcgttcacagatgcttcgcgattacctagaaaactaa
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