Rhodoluna lacicola: Rhola_00006850
Help
Entry
Rhola_00006850 CDS
T03203
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rla
Rhodoluna lacicola
Brite
KEGG Orthology (KO) [BR:
rla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rla03032
]
Rhola_00006850
03400 DNA repair and recombination proteins [BR:
rla03400
]
Rhola_00006850
Enzymes [BR:
rla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rhola_00006850
DNA replication proteins [BR:
rla03032
]
Prokaryotic type
DNA Topoisomerases
Rhola_00006850
DNA repair and recombination proteins [BR:
rla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rhola_00006850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AIC47492
UniProt:
A0A060JFZ8
LinkDB
All DBs
Position
695243..697324
Genome browser
AA seq
693 aa
AA seq
DB search
MSNNDYSARHLSVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEIIDNSVDEALAGHGNRIE
VTLHKDGSVEVTDKARGIPVDIEPKTGLSGVEVVFTKLHAGGKFGSGSYAASGGLHGVGA
SVVNALSQRLDVEVDRGGKTYAMSFRRGEPGIFDDKKGIKPDNPFKPFEDGSILREVGKV
GKNVTGTRVRYWVDPQIFIKDAVFALEELSARARQTAFLVPGLSLGINDARDGKSSKQEF
KFDGGIIEYAEYLAKDPALTSTWRLSGTGSFTETVPVLDASGNMVSKEVERSCDVDIAVR
WGTGYDTDVKSYVNIIATPKGGTHIQGFEQSLLKTLRTQIESNARKLKVGNDKVEKEDVL
AGLTAVVTVRLAEPQFEGQTKEILGTPAVKNIVANVVAKSLTARFASSKRDDKAQSALLL
EKVVAEMKSRISARSHKETQRRKNALESSSLPTKLVDCRTQDTAGSELFIVEGDSALGTA
KLARDSEFQALLPIRGKILNVQKASISDMLSNAECASIIQVIGAGSGRSFDLDSARYGKV
ILMSDADVDGAHIRTLLLTLFFRYMRPLVEAGRVFAAVPPLHRVEVVNAGSKANEVIYTY
SQAELEDLLKKLEKAGKRYKEPIQRYKGLGEMDADQLAETTMDKNARSLRRVRVEDAAAA
ETVFELLMGNEVAPRRDFIIDSADGFERERIDA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaacaacgattattcagcccgccacctctctgtactagagggtctagaagccgtt
cgcaagcggcctggtatgtacatcgggtctacagacagtcgcggcctcatgcattgtctt
tgggaaatcatcgataactcagttgatgaggcgcttgcaggtcacggtaaccgaatcgaa
gtcaccctgcataaggacggaagcgttgaggtaaccgacaaggcgcgtggaatcccggtt
gacatcgaacctaaaacagggctctctggtgtggaagttgttttcacaaagttgcacgcc
ggaggaaaatttggctctggttcatacgctgcctctggcggtttacacggagttggcgcc
tctgtagtaaacgctctatcacagcgactggatgtagaagtggaccgtggcggaaaaacc
tacgcaatgtcttttcgccgaggtgaacctgggatttttgatgacaaaaaaggcattaaa
cccgacaacccattcaagcctttcgaggacggttcaattcttcgtgaggtaggcaaggtc
ggcaagaatgtcaccggtaccagggttcgatactgggttgacccacaaattttcatcaaa
gatgctgtttttgctttggaggaactttcagctcgagctcgtcaaactgccttcctggtt
cctgggctttcgcttggtatcaatgacgccagagacggtaaatccagcaagcaggaattc
aagttcgatggcggaattatcgagtacgccgagtaccttgctaaagatccagcgctaacc
tcaacctggcgcttgtcaggaactggttcatttaccgaaactgtgccagtcctggatgca
agcggaaacatggtttcaaaagaggttgaaagaagttgcgatgttgatattgcggttcgt
tggggcacaggctacgacaccgatgtcaagtcatacgtaaacataattgccacacctaag
ggcggaactcatattcaaggattcgagcaatcgctcttaaaaactctgcgcacgcagatt
gaaagcaatgcaagaaaacttaaagttggcaacgacaaagttgaaaaagaagatgtttta
gccggcctaacagccgttgtcacggttcggctcgcagaaccgcaatttgagggacagacc
aaagaaatcttaggaactccagcggttaagaacatcgttgccaatgtcgttgcaaagtct
ctcaccgccagattcgctagttcgaaaagagacgacaaagcgcagtctgctctattgctt
gaaaaagttgttgcagagatgaaatcaagaatttctgctagaagccacaaagagactcag
cggcggaaaaacgctctagagagcagctcattacccaccaagttggttgactgtcgtacc
caagatactgcgggatctgagctatttattgttgagggcgactcagctttgggcactgcc
aaacttgcgcgcgacagtgaattccaagcgctattgcccattagaggaaagattctgaac
gtccaaaaagcatcaatttccgatatgctctcgaacgcagaatgcgcttctataatccag
gtgattggggctggttcagggcgtagctttgatttggattctgcccggtacggaaaagtt
atcttgatgtctgatgctgacgtagacggggctcacattcgaacccttttgctaaccctc
tttttccgttacatgcgcccattggtggaggctggccgggtattcgcggctgttcctccg
ctgcaccgcgttgaggttgtgaatgccggcagcaaggcgaatgaggtcatctacacctac
tcacaggcagagctcgaggacttactcaagaagcttgagaaggctggaaagcgttacaag
gaaccaatccagcgctacaagggtcttggtgaaatggatgccgatcaacttgccgaaacc
accatggataagaatgcacgcagcttgcgcagagttcgagtagaggacgctgccgcggcc
gagaccgtttttgaattgctgatgggcaacgaggttgctccacgtcgagacttcatcatt
gattcagctgacggtttcgagcgcgaaagaatcgacgcgtag
DBGET
integrated database retrieval system
