Rhodoluna lacicola: Rhola_00010460
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Entry
Rhola_00010460 CDS
T03203
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rla
Rhodoluna lacicola
Pathway
rla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rhola_00010460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rla03019
]
Rhola_00010460
03110 Chaperones and folding catalysts [BR:
rla03110
]
Rhola_00010460
03029 Mitochondrial biogenesis [BR:
rla03029
]
Rhola_00010460
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rla04147
]
Rhola_00010460
Enzymes [BR:
rla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Rhola_00010460
Messenger RNA biogenesis [BR:
rla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Rhola_00010460
Chaperones and folding catalysts [BR:
rla03110
]
Heat shock proteins
HSP60 / Chaperonin
Rhola_00010460
Mitochondrial biogenesis [BR:
rla03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Rhola_00010460
Exosome [BR:
rla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Rhola_00010460
Exosomal proteins of other body fluids (saliva and urine)
Rhola_00010460
Exosomal proteins of breast cancer cells
Rhola_00010460
Exosomal proteins of colorectal cancer cells
Rhola_00010460
Exosomal proteins of bladder cancer cells
Rhola_00010460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
DUF883
Motif
Other DBs
NCBI-ProteinID:
AIC47843
UniProt:
A0A060JMN1
LinkDB
All DBs
Position
complement(1057393..1059012)
Genome browser
AA seq
539 aa
AA seq
DB search
MAKIIHFDEEARRGLERGLNILADTVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPFERIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPITLKRGIE
KAVKAVIEELHSNAKPVETKEQIAATASISAGDSQIGELIAEAIDKVGREGVVTVEESNT
FGIELELTEGMRFDKGYVSAYMVTDPERQEAVLEDAYVLIANSKISNIKDILPIVDKVIQ
ANKPLLIIAEDIDGEALATLIVNKIRGIFKSVAVKAPGFGDRRKAMLQDIAILTGGQVIS
EEVGLKLDATTLDLLGRARKVVITKDETTIVEGAGDADMIAGRVEQIRREIDNTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
GKAAFEKLTLTGDEAVGANIVRVAISAPLKQIALNAGLEPGVVAERVAGLPSGHGLNAAS
GEYVDMLKEGINDPVKVTRSALQNAASIAGLFLTTEAVVAEKPEPAAPAPANQGGGMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatcattcactttgatgaagaggcccgccgcggtctagagcgcggtctaaac
atcctcgcagacaccgtaaaggtaaccctcggcccacgtggacgcaacgtagttcttgaa
aagaagtggggcgccccaaccatcacaaacgatggtgtttcgatcgctaaggaaatcgag
ctagatgacccgttcgagcgcattggtgccgagctagttaaagaagtagctaagaagact
gacgacgttgccggtgacggaaccacgactgcaaccgttcttgcacaggctcttgttcgc
gaaggtcttcgcaacgtggctgccggtgcagacccaatcactttgaagcgtggaatcgag
aaggcggtcaaggccgtcatcgaggagcttcactcaaacgcaaagccagttgagaccaaa
gagcagattgctgctacagcgtctatctctgctggtgactctcagatcggtgagctaatc
gccgaagcaatcgacaaggttggccgtgagggtgttgtaaccgttgaagaatcaaacacc
tttggtattgaacttgaactaaccgagggtatgcgcttcgacaagggttacgtatcggct
tacatggttaccgacccagagcgtcaggaagcagttcttgaagacgcatacgttttgatc
gcaaactcaaagatctcaaacatcaaggacatcttgccaattgttgacaaggtgattcag
gcaaacaagccgttgctaatcatcgccgaagacattgatggtgaagcactagcaaccttg
atcgtcaacaagatccggggaatcttcaagtcagttgcagttaaggctcctggctttggt
gaccgtcgtaaggcaatgcttcaggacatcgcaatcttgaccggtggtcaggtaatttct
gaagaagttggtctgaagctagatgcaaccactcttgatcttctaggtcgggcacgcaag
gttgttatcaccaaggacgaaaccacaatcgttgaaggtgccggcgatgccgacatgatc
gcaggacgcgttgagcagatccgtcgcgagattgacaacaccgatagcgactacgaccgc
gagaagcttcaggagcgtctagccaagctagccggtggtgttgcagttattaaggctgga
gcagcaaccgaggttgagcttaaggagcgcaagcaccgcattgaagacgcagtgcgtaac
gcaaaggctgctgttgaggaaggcatcgttgccggtggtggtgttgcattgctacaggct
ggcaaggctgcattcgagaagctaactcttaccggtgacgaggctgttggtgcgaacatc
gttcgcgttgcaatctcagctccgctaaagcagatcgcactaaacgcaggtctagagcca
ggcgtagtggcagagcgcgttgcaggtctaccttcaggtcacggtctaaacgccgcatcc
ggtgaatacgtagacatgctgaaagaaggcatcaacgaccctgtaaaggtaactcgttca
gctcttcagaacgctgcttcgatcgcaggtctattcctaactaccgaagcagtagttgca
gagaagccagagccagcggctcctgctcctgcaaaccagggcggcggcatggacttctaa
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