Rhodoluna lacicola: Rhola_00012120
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Entry
Rhola_00012120 CDS
T03203
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rla
Rhodoluna lacicola
Brite
KEGG Orthology (KO) [BR:
rla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rla03016
]
Rhola_00012120
Enzymes [BR:
rla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Rhola_00012120
Transfer RNA biogenesis [BR:
rla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rhola_00012120
Prokaryotic type
Rhola_00012120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AIC48005
UniProt:
A0A060JGZ4
LinkDB
All DBs
Position
complement(1221750..1222622)
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AA seq
290 aa
AA seq
DB search
MNKPVDPSVDGFIRYRIDLAYDGTNYWGFAAQKKHRTVQGELLKALTTVFGKSKTAFDMR
VAGRTDAGVHATGQVIHIDLTQKQLKRLGRTVGMMGSLNDLLPQDIRIYSVSEAPAGFDA
RYSASYRRYRYVIADKLAPKNPLLARSTLWIKHELDLVQMQASALGLIGLHDYASFCRPK
LGATTIREVRELTVKRNPDAGNVIEVEILADAFCHNMVRAIVGALIAAGEGKTTPDGVIK
RLEKRSRIGSFKVQPPHGLTLIEVGYPADDKLAAQAEMAKNLRTLDEAED
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcccgtcgacccatcggttgacgggtttattcgttaccggattgacctggcc
tacgacggcaccaattactggggcttcgcagcgcagaagaagcaccgcacagtgcaggga
gaattgctcaaggcactgactaccgtttttggtaaatccaagactgcgttcgatatgcga
gttgccggccgcaccgatgctggtgtccacgccaccggccaggtaattcacattgacctc
acccaaaagcagctaaagcgcctgggtcgcacggttggcatgatgggcagcctgaatgac
ctgcttcctcaagacatccgcatttactccgtttccgaggctccagccggctttgacgcc
cgatactcggcctcctaccgccggtatcgctacgtaattgccgacaaattggccccaaaa
aacccgcttttggcccgttcaaccctgtggatcaagcacgagcttgacctggtccagatg
caggcctcggccctgggcctaattggattgcacgactacgcctcattttgccgccccaaa
cttggggcaaccaccatccgtgaggttcgcgaacttaccgtaaagcgcaaccccgatgcc
gggaacgttatcgaggtcgagattttggccgatgccttctgccacaacatggtgcgtgct
atcgtgggggctctaattgccgcgggggagggtaaaactactcctgatggcgtgatcaag
cgtcttgaaaagcgctcaagaattggctcattcaaggtccaaccgccacacggtttgacc
ctgattgaggtgggttatccggccgacgacaagctcgcggcacaggccgagatggccaag
aatctgcggactttagacgaggccgaggactga
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