Rhodomicrobium lacus: QMO75_01260
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Entry
QMO75_01260 CDS
T09241
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rlac
Rhodomicrobium lacus
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlac03400
]
QMO75_01260 (addB)
Enzymes [BR:
rlac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QMO75_01260 (addB)
DNA repair and recombination proteins [BR:
rlac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QMO75_01260 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WKW51153
LinkDB
All DBs
Position
complement(285239..288478)
Genome browser
AA seq
1079 aa
AA seq
DB search
MRDGGAQLELGFSAARAAAAPVFTCPPHRPFLPVLAAAILDGAFFGEGEPEPHDLPALNV
YVPSQAAVTPLKLALLNLSPCGATFLPRIRVLGDADPLDMFAAYAPHMDAGAALALLREA
LDVPKPAGDIERRVHVSAAAMKAARDIHSTRMELGEQLFSAVTAASAAKIAADIASLIDD
AHRERADLSKIDRLDRGHASGSEQISLQILRAVRKAWDAHKKRSRRLDREERRNRLMALE
AAFIRASSAPVIVAGSTGSVAATMGLMEALVGRARSAVILHDLDRALDDASWQTISQHPE
HPQHGLWQLLARLGVDRDGVREIETARALPAGGDPIRAAFLSEALRPASTTARWADYVAV
RKTEAGRADADAEATGREVSSDVSLHAAPRGTLAPGLTLVEAETSQEEAAVVALILRAAL
EDEAAHVALVTPDDALRARVRHALAGWGMASEPPAAPRHAFALRVAAAVSSGKPEDFTAL
LRLAHGANRARFLRLAELVDLGAARQMWRPATMDSIPAALARAQHAIASGEARHPAMRRI
GAEEWEAARLLAGDVLDALSPLTANAADPAPEHGDTSPLPFFRWVTVHDEALARLAAIGL
VCDEGGERPSLADVFAVDVPTLALDIKEYAAFFAELARTEPTSDAQSPHPRLLLLSPLDA
RLLAADVVVLGGLNEGVWPQTPGPSPWLNRQDRAIVGLSPEERRVGQAAHDFASLAAVAP
RVVLTRAKKANGSLARPSRWVARIATLARGVGRFAEIDTSAAWLELARARRAPAAVTPIA
PPEPRPPLSARPRRLSVTAIETWFANPYAIYARSILGLEPMRRFGETHDARDKGTLYHAA
LNRFFEAWPDRLPDDAAARLVACLDRAAEELGFDLDSAPFWRPRFARFADWFAATEAQRR
KGLRLLKSEVGGKVKLTAEGAAGPFEVTARADRIDLGEDGSLRIFDFKTSANAATTSARR
GAPQLALEGMLAIEGAFAGLPANGAPDLCYIVASGGEPPGDIVTLKMPCGEAIAAAKAGL
LLRIARFDDEATPYTYEARAIFRDKADNDPYAHLARVKEWSAAAGGEDNGVEDGGGGDD
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgagggacggcggcgcacagcttgaacttgggttttcggccgcgcgcgccgctgccgcc
cctgtcttcacctgtccgccgcaccgcccgtttctgcccgtgctcgccgccgcgattctg
gacggcgcgtttttcggcgaaggcgagcccgagccgcacgacctccccgcgctgaatgtc
tatgtgccgtcgcaagccgccgtcacgccgctgaagctcgcgctcctcaacctaagcccc
tgcggtgcaactttccttccgcgcatccgcgtgctgggcgacgccgatccgctcgacatg
ttcgcggcctacgccccacatatggacgccggggccgcgctcgccctcctccgcgaggcg
ctggacgtgccgaaacctgccggggatatcgaacgccgcgtccatgtgagcgctgcggcg
atgaaggccgcgcgcgacatccacagcacgcggatggagcttggcgagcaactgttctct
gccgtgacggcggcaagcgcggcgaagatcgcggcggacatcgcaagcctcatcgacgac
gcacaccgcgaacgagccgacctctcgaaaatcgaccggctcgacaggggccacgcttcc
ggcagcgagcagatctcgctgcagatcctgcgcgccgtgcgcaaggcttgggatgcgcac
aagaagcgcagccgccgtctcgaccgcgaagaacgtcgcaatcgcctcatggcgcttgag
gcggcgttcatccgagcgagcagcgcgccggttatcgtcgccgggtcgaccggcagcgtc
gccgcgaccatgggactgatggaggcgcttgtcgggcgcgcgcgctcggccgtcattctg
cacgacctcgaccgcgcgctcgatgacgcatcgtggcagaccatctcacagcacccggag
catccgcagcacggcctttggcagttgctcgcgcgacttggcgtcgaccgcgacggtgtg
cgcgagatcgaaaccgcgcgcgctctgcccgctggcggcgatccgatccgcgcggcgttc
ctcagcgaggccctgcggcccgcctccacgacggcaagatgggcggattatgtggcagtc
cggaagaccgaggcgggccgcgccgacgctgacgcagaggcaaccggccgcgaggtctcc
tccgacgtttccttgcatgccgcgccgcgcggcacgctcgcgccggggctgacgctcgtc
gaagccgaaacgagtcaggaagaagcggcggtcgtcgcgctgatccttcgcgccgcgctc
gaagatgaagctgcgcatgtcgcgctcgtcacgcccgacgacgcgctgagggctcgcgtc
cgccatgcccttgcggggtggggaatggcaagcgaaccaccggcagcgccgcgccatgct
ttcgccctgcgcgtggcggccgcggtgtcaagcggcaagcccgaggatttcacggcgctg
ctcaggctcgcgcatggcgcgaaccgcgcccgttttcttcgcctcgccgaactcgtcgat
ctcggcgccgcacggcaaatgtggcgcccggctaccatggacagcattccggcggcgctt
gcccgcgcgcagcacgccattgcgagcggcgaagcccggcacccggccatgcgccggatc
ggcgccgaggaatgggaagccgcgcggcttctcgcgggcgacgtgctcgatgcgctgtcg
ccgctgaccgcgaacgccgccgacccggcaccggagcacggcgacacctccccccttccc
ttcttccgttgggtgacggtgcatgacgaagcgctggcgcgtctcgcggctatcggcctc
gtgtgcgatgagggcggagaaagaccttcgcttgccgacgtgtttgccgtcgacgtgccg
accctcgcgctcgacataaaggaatatgccgcctttttcgccgaactggcgcggacggaa
ccgacatccgacgcgcagagtccgcatccccgcctgttgctcctgagccctctcgacgcg
cgccttcttgctgccgacgtcgtcgtcctcggcgggctgaacgagggcgtttggccgcag
acgccggggccgagcccttggctgaaccggcaggaccgggcgatcgtgggtctctcgccc
gaggaacgccgcgtcgggcaggccgcgcatgatttcgcctcgctcgccgccgtcgcaccg
cgcgtcgtgctcacccgcgccaagaaggcgaatggcagcctcgcacgcccgagccgctgg
gtcgcgcgcatcgccacgctcgcgcgcggcgtgggccggttcgcggagatcgacaccagc
gcggcatggctcgaattggcgcgggcgcgccgcgcgcctgcggcggttacgcccatcgcg
ccaccggaaccgcgtccgccgctctccgcccgcccgcgccgcctttccgtcaccgccatc
gagacgtggttcgcgaacccctatgcgatctacgcgcgttccatcctcgggctcgaaccg
atgcgccgcttcggcgagacccacgacgcccgcgacaagggcaccctctatcacgcggcg
ctcaaccgctttttcgaggcctggcccgaccgcttgccggacgatgcggcggcacgcctc
gtcgcatgcctcgaccgcgcggctgaggaacttggcttcgacctcgactccgcgccgttc
tggcgtccacgcttcgcccgcttcgccgactggttcgcggcgacggaagcgcaaaggcga
aagggcctgcggctcctgaagagcgaggtcggcggcaaggtgaagctcacggcagaggga
gcggcaggaccgtttgaagtgacggcgcgagcggatcgcatcgaccttggcgaggatggt
tcgctgcggatcttcgacttcaagaccagcgcgaatgcggcaaccacatccgcgcggaga
ggcgcgcctcagctcgcgctggaaggcatgctcgccatcgaaggcgcgttcgctggactg
ccggcgaacggcgcgcctgacctctgctatatcgtggcgtcgggtggagagccaccgggc
gacattgtcacgctgaagatgccgtgcggggaagccatcgccgccgcgaaggcggggctg
ctcctgcgcatcgcgcgcttcgacgacgaggcgacgccttacacctatgaggcccgcgcg
atcttccgcgacaaggccgacaacgacccgtatgcgcatctggcgcgcgtcaaggaatgg
tcggcggcggcaggcggtgaagacaatggagtggaagacggaggcggcggcgatgactga
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integrated database retrieval system
