Rhodomicrobium lacus: QMO75_03230
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Entry
QMO75_03230 CDS
T09241
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rlac
Rhodomicrobium lacus
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rlac03000
]
QMO75_03230
Transcription factors [BR:
rlac03000
]
Prokaryotic type
Helix-turn-helix
Other families
QMO75_03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_lid_14
HTH_30
AAA_5
HTH_17
HTH_1
HTH_23
PAS
HTH_20
HTH_29
GAF_2
HTH_28
HTH_22
Mg_chelatase
HTH_psq
HTH_7
HTH_Tnp_ISL3
HTH_Tnp_1
RsmI_C
HTH_24
AAA_2
Phage_NinH
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
WKW51514
LinkDB
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Position
744477..746420
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AA seq
647 aa
AA seq
DB search
MENAAKGASSLDRARKMLDRGEIPPAALVGATVSRSWERCLGAGLVPRFNAEDRISTSRL
KETLERRRELLTRARPVMDYLYAQVRGSGSMVVLADEQGVLIEALGDADFVERASRVALK
PGASWHETSRGTNAIGTAIVEGAAVLVHGAEHFLEHNRFLTCAAAPVTGSDGRILGVIDV
SGHHRVRHPHTSGLVSAASHMIENRLFELHHESHMRLRLHPQAEGIGTLAEGLVALAEDG
RIAGANHAARVLLDLRAEDIGSAAIGAVLSLDMARLCDLARRQAGRVEPTVSRAGRPLCL
RIEPGSRIAPSRRRETPLALPLRDPLADLDTGDETMKLVIDRARKVAGKPIPILLQGESG
AGKERVSAAIHASGPRKDAPFVAVNCAALPEHLIESELFGYAPGAFTGARREGSPGRIRE
ANGGTLFLDEIGDMPLSLQSRLLRVLQEREVVPLGGGKPAKVDFALIAASHKPLKAEVEA
GRFRADLYYRLNGLTLKLPALRERTDFAAIVARMLSAFEPGRSLMLAPDVAAAFARYRWP
GNLRQLSNALLFACAVVDEGEVVIGWRHLPDDLIEDLQNLDTPSRMADDACAADSLRASS
DIMIERAVLASEGNMSEAARRLGISRNTLYRRLKACPRPRPKTRPLQ
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgccgcaaagggcgcgtcgtcgttggatcgcgcccgcaagatgctggatcgc
ggggaaattccgcccgccgccctcgttggcgcgaccgtctcgcgaagctgggaacgatgt
ctcggcgcggggcttgttccgcggttcaatgcggaagaccggatttccacctcgcgcctg
aaggaaacgctggagcgccgacgcgagcttctgacacgcgcgcgtcccgtcatggactat
ctctatgcgcaggtgcgcggctccggcagcatggtcgtccttgccgacgagcagggcgtg
ctgatcgaggcgctgggcgacgccgacttcgtggagcgtgcctcgcgcgttgcgctcaag
ccgggggcgtcgtggcatgaaacgagccggggcaccaatgccatcggaaccgccatcgtc
gaaggcgcggcggtgcttgtgcatggggccgagcattttcttgagcacaaccgctttctg
acgtgcgccgccgcgcccgtgacgggctcggacgggcgcattctcggtgtcatcgatgtg
tcgggccatcatcgcgtacggcatccgcacacgtcgggtcttgtcagcgcggcgagccat
atgatcgagaatcgccttttcgaacttcaccacgagagccacatgcggcttcggcttcat
ccgcaggcggaaggcatcggcacgctcgccgaagggcttgtcgcgctcgccgaggacggc
cgcatcgctggtgcgaaccatgctgcgcgcgtgcttctcgacctccgggccgaagacatc
ggaagcgccgcgatcggcgccgtcctgtcgctcgacatggcgcgcctttgcgatctcgcg
cgccgccaggcgggccgcgtcgaacccaccgtcagccgtgcggggcggcctctgtgtctt
cgcatcgaaccgggcagccggatcgctccgtcgcgccggcgggagacgccgcttgccctg
ccgcttcgggatccgctcgccgacctcgacacgggcgacgagacgatgaagcttgtgatc
gaccgggcccgcaaggtggcgggcaagccgatccccatcctgcttcagggcgagtcgggc
gcaggcaaggagcgcgtttccgccgctatccatgcttccgggccgcgcaaggatgcgccg
ttcgtcgcggtgaactgcgcggcgttgccggaacacctgatcgaatcggagctgttcgga
tatgcaccgggtgccttcaccggcgctcgccgcgagggatcgcccggccgcatccgcgag
gcgaacggcggcacgctgtttctcgacgagatcggcgacatgccgctttcgctgcaatcg
cgcctcttgcgcgtgcttcaggagcgcgaggtggttccgctcggcggcggcaagcccgcg
aaggtggattttgccctgatcgcggcgagccacaagccgctcaaggccgaggttgaggca
ggacgcttccgcgccgatctttattatcggctgaacggccttacactgaagcttccggcg
ctccgcgagcgcaccgatttcgcggccatcgtcgcgcgcatgctctcggcgttcgagccg
ggaaggtcgctgatgctggcgccggacgtggccgccgcgtttgcccgctatcgctggccg
ggcaatctgcgccagctttcgaatgcgctgctttttgcatgcgccgtggtcgacgagggt
gaggtcgttatcggctggcggcacctgccggacgacctgatcgaggatcttcagaacctc
gataccccgtccaggatggcggatgacgcctgcgcagccgactcgctacgcgccagctcc
gacatcatgatcgagcgggccgtgctcgcaagcgaaggcaacatgtcggaggccgcgcgc
cgtctcggcatcagccgcaacacgctctaccgcaggctcaaggcttgcccgcgaccgcgc
ccgaagacgcgcccgctacaatag
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