Rhodomicrobium lacus: QMO75_03435
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Entry
QMO75_03435 CDS
T09241
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rlac
Rhodomicrobium lacus
Pathway
rlac03030
DNA replication
rlac03410
Base excision repair
rlac03420
Nucleotide excision repair
rlac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QMO75_03435 (polA)
03410 Base excision repair
QMO75_03435 (polA)
03420 Nucleotide excision repair
QMO75_03435 (polA)
03440 Homologous recombination
QMO75_03435 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlac03032
]
QMO75_03435 (polA)
03400 DNA repair and recombination proteins [BR:
rlac03400
]
QMO75_03435 (polA)
Enzymes [BR:
rlac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QMO75_03435 (polA)
DNA replication proteins [BR:
rlac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QMO75_03435 (polA)
DNA repair and recombination proteins [BR:
rlac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QMO75_03435 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QMO75_03435 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
Nif11
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WKW52482
LinkDB
All DBs
Position
complement(795302..798256)
Genome browser
AA seq
984 aa
AA seq
DB search
MTAAPSLAETPVSTAPAEAAVPPGSRVYLIDGSGYIFRAFHALPPLTRPSDGLPVGAVHG
FCNMLWKLLRETKGEKAPTHLAVIFDHSRASFRTEISAAYKAQRPEPPAELVPQFALIRD
AVRAFNVACIEQEGYEADDIIAAYTCQAADAGAEVVIVSSDKDLMQLVRPGVTMLDTMKN
KVIGEAEVIEKFGVPPAKVVDVQALAGDSVDNVPGVPGIGIKTAAELIREYGDLENLLAN
APLIKQKMRRERLIEFADQARLSRRLVELSCDMPVEKPLDLAAVEEPDPHALLEFLRTME
FNSLTKRISEAFGVEPSTGEMTRPSPAEAVEGTAHDKAPGGDTPADEVRRVEAWLKAIPF
DRSLYQQVTDLQTLEDWIAAATEQGFVAFDTETTALDAMSAKLCGVALALEPGRACYIPL
AHRAGDGLDFTGAGEIAQLPMASALPRLKALLEDDSVLKIGQNIKYDALIMRRHGDIRVA
PYDDTMLMAYACDQGRGGLAGFGMDELSKRHLSHTPIAFTDVAGKGKAQSTFDCIAVDKA
TEYAAEDADVTLRLWHLFRARLAAEGMAAVYATLERPMPAVLGAMEFNGIRVDRAVLSRL
SADFAQSLARLEDEIYELAGQRFNIGSPQQIADLLFGKFGLPGAKKTSTGKWSTGAKVLE
DLVSSEDLTEDQRRLPGKLLEWRQLAKLKSTYTDSLPQHIDADTGRIHTCFSLASTSTGR
LSSTEPNLQNIPIRTREGRMIRSAFIAEPGKKLISADYSQIELRVLAHMADIPALKHAFA
EGLDIHAMTASEMFGVPVKDMPGEVRRRAKAINFGIIYGISAFGLSQQLGIPRQEAGDYI
ARYFERFPGIRAYMDAMRSKVHEDGHVETLFGRKIHFPEINTPKWNMRQFFERAAINAPI
QGTAADIIRRAMVRVPAALEKAGVRAKMLLQVHDELVFEADDAEVEATIKAVTRVMERAA
EPAVAFSVPLKVDARAAQNWDEAH
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgccccatcgctcgccgaaacgcccgtttccaccgcccccgccgaagccgcc
gtgccacctggcagccgtgtctatctcatcgacggctcgggctacatcttccgtgccttc
cacgcgctgccgccgctgacgcgcccgtcggacgggttgccggtcggtgcggtgcacggt
ttctgcaacatgctgtggaagctgcttcgcgagacgaagggcgaaaaggcgccgacgcat
ctcgcggtgatcttcgaccacagccgcgcgagcttccgcaccgaaatttccgcggcctac
aaggcgcagcgcccggaaccgcccgccgaactcgtcccgcaattcgcgctgatccgcgat
gcggtgcgcgccttcaacgtcgcctgtatcgagcaggagggctacgaggccgacgacatc
atagcggcctacacctgccaggcggcggacgcgggcgcggaggtggtcatcgtctcgtcc
gacaaggatctgatgcagctcgtccgccccggcgtgaccatgctcgacaccatgaagaac
aaggtgatcggcgaggcggaagtgatcgagaaattcggggtgccgccggcgaaggtcgtc
gacgtgcaggcgctcgcaggcgattcggtcgacaacgtgccgggggtgccgggcatcggc
atcaagacggcggcggaactcatccgcgaatatggcgacctcgaaaacctgctcgccaat
gcgccgctcatcaagcagaagatgcggcgcgagcggctcatcgagttcgccgaccaggcg
cggctgtcgcgccgcctcgtcgagcttagctgcgacatgcccgtcgaaaagccgctcgac
ctcgccgccgtcgaagagccggacccgcacgcgctgctcgaattcctgcgcacgatggaa
ttcaactcgctgacgaagcggatttcggaggcgttcggcgtggagccgtccacgggggag
atgacgcggccatcgcccgccgaagcggtcgaagggaccgcccacgataaagcgcccggc
ggcgacacgcccgccgacgaagtgcgccgcgtggaagcgtggctgaaggcgatcccgttc
gaccgctcgctttaccagcaggtgacggacctccagacgctcgaagactggatcgcagcc
gccaccgaacaagggtttgtcgccttcgacaccgaaacgacggcgctcgacgccatgtcc
gcgaagctgtgcggcgtggcgctggcgctcgaacccggccgcgcctgctacattccgctc
gcgcatcgcgcgggcgacggcctcgattttacgggcgcgggcgagatcgcgcagcttccg
atggcaagcgccctgccccgcctgaaagcgctcctcgaagacgacagcgtgctgaagatc
ggccagaacatcaaatacgacgcgctcatcatgcgccgccatggcgatatccgcgtcgcg
ccgtacgacgacaccatgctgatggcctatgcctgcgatcaggggcgcggcgggctcgcg
ggtttcggcatggacgagttgtcgaagcgccatctcagccacacgcccatcgccttcacc
gatgttgcgggcaagggcaaggcacagtccaccttcgactgcatcgcggtcgacaaggcg
acggaatacgccgccgaagacgccgacgtgacgcttcgcctgtggcacttgttccgcgcg
cgcctcgccgccgagggcatggccgccgtttacgcgacgctcgaacgcccgatgcccgct
gtgctcggcgccatggaattcaacggcatcagggtcgatcgcgcggtcctctcgcgcctc
tccgccgacttcgcacagagcctcgcgcgccttgaggatgagatctacgagcttgccggc
cagcgcttcaacatcggctcgccgcagcagatcgccgacctgcttttcggcaagttcggc
ctgcccggtgccaagaagacctccaccggcaagtggagcacgggcgcgaaggtgctcgaa
gacctggtatcgagcgaagacctcaccgaagaccagcgccgcctgccgggcaagctcctc
gaatggcggcaactcgcgaagctgaaaagcacctacaccgactcgctgccgcagcacatc
gacgccgacacgggccgcatccacacctgtttttcgctcgcctccacctcgacagggcgg
ctgtcatcgaccgagccgaacctgcaaaacatccccatccgcacacgcgaaggccgcatg
atccgctcggccttcatcgcggaaccgggcaagaagctcatctcagccgattacagccag
atcgagcttcgcgtgctcgcccatatggccgacattccggcgctgaaacacgccttcgcc
gaagggctcgacatccacgcgatgacggcgagcgagatgttcggcgtgccggtgaaggac
atgccgggcgaggtgcgccgccgcgcgaaggccatcaatttcggcatcatctacggcatt
tcagcgttcggcctgtcgcagcagctcggcatcccgcgtcaggaggcgggcgactacatc
gccaggtatttcgagcgcttccccggcatccgcgcctatatggacgcaatgcgctcgaag
gtgcacgaagacggccatgtggagacgctgttcggccgcaagatccacttccccgagatc
aacacaccgaagtggaacatgcggcagttcttcgagcgcgcggcgatcaacgcgccgatt
cagggcaccgccgccgacatcatccgtcgcgcgatggtgcgcgtgcccgccgcgctggaa
aaggcgggcgttcgcgcgaagatgctgcttcaggtgcacgacgaactcgtgttcgaggcc
gacgatgccgaggtggaagccacgatcaaggccgtgacccgcgtcatggagcgcgccgcc
gagcccgccgtggccttctccgtgccgctgaaggtggacgcccgcgccgcgcagaactgg
gacgaggcgcattag
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