Rhodomicrobium lacus: QMO75_04875
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Entry
QMO75_04875 CDS
T09241
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rlac
Rhodomicrobium lacus
Pathway
rlac00260
Glycine, serine and threonine metabolism
rlac00460
Cyanoamino acid metabolism
rlac00630
Glyoxylate and dicarboxylate metabolism
rlac00670
One carbon pool by folate
rlac00680
Methane metabolism
rlac01100
Metabolic pathways
rlac01110
Biosynthesis of secondary metabolites
rlac01120
Microbial metabolism in diverse environments
rlac01200
Carbon metabolism
rlac01230
Biosynthesis of amino acids
rlac01240
Biosynthesis of cofactors
rlac04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QMO75_04875 (glyA)
09102 Energy metabolism
00680 Methane metabolism
QMO75_04875 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QMO75_04875 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
QMO75_04875 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QMO75_04875 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
QMO75_04875 (glyA)
Enzymes [BR:
rlac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
QMO75_04875 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WKW51817
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Position
1109971..1111272
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AA seq
433 aa
AA seq
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MSTASSAVASFFSAPLSDADPDIYKVLGRELERQRDEIELIASENYVSRAVIEAAGSVLT
NKYAEGYPGKRYYGGCQEVDVAEELAIARAKQLFGCDFANVQPHSGSQANQGVFLAVLKP
GDTILGMGIDMGGHLTHGAAPNQSGKWFNAVHYGVRREDGYIDYEQVERLAKEHKPKLII
AGGSAYARQFDFKRFREIADEVGALLLVDMAHFAGLVAGGQHPSPFPHAHFATTTTHKTL
RGPRGAIILTNDGDLAKKVNSAIFPGLQGGPLMHIIAAKAVAFGEALKPEFQHYAKAVVD
NAKALGVALKEGGVDLVSGGTDNHLLLVDLRPKGLTGKAVEAALGHAHITVNKNGVPYDP
EKPTVTSGIRVGSPAGTTRGFGVAEFTQIGGLIVEVLEGLKAGGDAAAKAQEKVKAEALA
LCGRFPIYPGIKA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgcatcttccgccgtcgcatcgtttttttccgcgccgctttccgacgccgat
cccgatatctataaagtgctcggccgcgagcttgaacgccagcgcgatgaaatcgagctg
atcgcgtccgagaactatgtatcccgcgccgtgatcgaggcggcaggctcggttcttacc
aacaaatatgcggaaggctatccgggcaagcgttactatggcggctgtcaggaagtcgac
gtcgccgaggaactggccatcgcccgcgccaagcagcttttcggctgcgacttcgcgaat
gtgcagccgcattccggcagtcaggccaatcagggtgtgtttctcgcggtcctgaaaccg
ggcgacaccattctcggcatgggcatcgacatgggcggccacctcacccacggcgcagcc
ccgaaccagtcgggcaaatggttcaacgcagttcattatggcgtccgccgcgaagacggt
tatatcgactacgagcaggtcgagcggcttgcgaaggagcataagccgaagctcatcatc
gcgggcggctccgcctatgcacgccagttcgatttcaagcgcttccgcgagatcgcggac
gaagtgggcgcgctgctcctcgtcgacatggcgcatttcgcggggctggtcgcgggcggc
cagcatccgagcccgttcccgcacgcgcatttcgccacgacgacaacgcacaagacgctt
cgcggcccacgcggcgccatcatcctgacgaatgacggcgacctcgcaaagaaggtcaat
tcggcgatcttccccggccttcagggcggcccgctgatgcatatcatcgccgcgaaggcc
gtggctttcggcgaagccctgaagcccgaattccagcactatgccaaggccgtggtggat
aacgcgaaggcgctcggcgtggcgctcaaggaaggcggcgtcgatctcgtctccggcggc
accgacaatcacttgctgctcgtcgacctgcggcccaagggcctcaccggcaaggccgtg
gaagccgcccttggtcatgctcatatcacggtcaacaagaacggcgtgccctacgatccc
gagaagccgaccgttacctcgggcattcgcgtcggatcgcccgctggcaccacgcgcggt
ttcggcgtcgccgagtttacgcaaatcggcggcctgatcgtagaggtgctggagggcctg
aaggccggcggagacgccgccgcgaaggcgcaggaaaaggtcaaggccgaggcgctggcg
ctgtgcgggcgcttcccgatctatccgggcatcaaggcgtaa
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