Rhodomicrobium lacus: QMO75_08490
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Entry
QMO75_08490 CDS
T09241
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
rlac
Rhodomicrobium lacus
Pathway
rlac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QMO75_08490 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rlac03000
]
QMO75_08490 (nifA)
Transcription factors [BR:
rlac03000
]
Prokaryotic type
Helix-turn-helix
Other families
QMO75_08490 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA_2
GAF_3
Mg_chelatase
AAA
AAA_3
AAA_16
BrxC_BrxD
UPF0175
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WKW49341
LinkDB
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Position
complement(1885460..1887289)
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AA seq
609 aa
AA seq
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MTSSAPAGTVTVPGSVRYSDTALSGIYEISKIVTSPSSLRVMLNNVVSVMSSFLDMRLST
LMLLDKAGDPEIKVSASTEPSIDPSEDGDLPLAVIDQIVATASPLVVQNCALHPSFAGWK
RLGRVGPNVVQTFIGVPIRVDAKVVGTLAIERVWQGSMDVRIDHDVRFLTMVANLVGQAL
KLHRVVAEDRERLIHEQHRLAKELSNIKAKAPPPKVTGILGKSRAIRAVTERIEQVAKSN
APVLIRGETGTGKELFARAIHELSRRKGKPFVKVNCAALPEGVIESELFGHEKGAFTGAV
GLRKGRFELADGGTIFLDEIGEISPSFQAKLLRVLQEGEFERVGGQHTLKINFRLVCATN
RALEQMVAEGKFRADLYYRINVVPLMLPPLRERQGDIPELAQHFLSRFAEENGYQLSFGP
DAMEVLCKCYFPGNIRELENCIRRTAAMALGDVIHAADFACQHGHCLSSMLWKGPASGES
ANEPQHHRASENNANPPRANQSAPASSPYTPPPAPEPTEGRNGYANGAANGNGNGNGNGA
SHNGASNGSDVAAHDDADGGGYAQLSRDTLINALEKTGWVQAKAARILGLTPRQVGYALK
KHGIEMKRY
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacatcttccgcaccggcgggcaccgtcacggttccgggaagcgtgagatacagcgat
acagcgctgagcggcatctacgagatctcgaagatcgtgacctcgccctcaagcctcagg
gttatgctgaataatgtcgtctcggtgatgagttcgttcctcgacatgaggctttcgacg
ctcatgctgctggacaaggcgggcgatcccgaaatcaaggtgtcggcctcgacggagccg
agtatcgacccgagcgaagacggggatcttccgctcgccgtcatcgatcagatcgtggca
accgcctccccgctcgtggtgcagaattgtgcgcttcatccttcgttcgccgggtggaag
cgcctcggccgcgtcggccccaatgtcgtgcagaccttcatcggcgtgccgatccgcgtc
gacgcaaaggtggttggaacgcttgccatagaacgtgtctggcagggcagcatggacgtg
cgcatcgatcacgacgtccgcttcctcaccatggttgcgaacctggtcggccaggcgctg
aaactccatcgcgtcgtcgcggaggaccgcgagcgcctcattcacgagcagcatcgtctc
gccaaggaactgtccaacatcaaggcgaaggccccgccgcccaaagttacaggcattctc
ggcaagagccgggccataagagcggttacggaacgcatcgaacaggtcgcgaaatcgaac
gcgccggttctcattcgcggcgaaaccggcacaggcaaggagcttttcgcccgagcgatc
cacgaactttcgcgccgcaagggcaagccgttcgtcaaggtgaattgcgcggcgctgccg
gaaggcgtcatcgagtcggagttgttcggacacgagaaaggcgcgttcaccggcgcggtc
ggccttcgcaaggggcggttcgagcttgcggatggcggcacgatctttctcgacgaaatc
ggcgagatttccccatcgtttcaggccaagctcttgcgcgtgctgcaggagggcgagttt
gaacgtgtcggcggccagcatacgctgaagatcaatttccgtctcgtctgcgccaccaac
cgcgctctcgaacagatggtggcagagggcaagtttcgagccgacctctactaccgcatc
aacgtcgtgccgctcatgctgccgccgctgcgcgagcgccagggcgacattcccgaactc
gcccagcacttcctcagccgcttcgccgaagaaaacggctatcagctttcctttggcccc
gacgcgatggaagtgctgtgcaagtgctacttcccgggcaatatccgcgagctggaaaac
tgcatccgccgcaccgccgcaatggctctcggcgacgtgatccacgcggccgatttcgcc
tgtcagcacgggcattgcctgtcttcgatgctgtggaagggaccggcaagcggggagtcg
gcgaacgagcctcagcaccatcgcgcttccgagaacaacgccaatccgccgcgcgcaaac
cagtctgcccccgcatcctctccttacactccgccgcccgcgccggagccgacggagggc
cgaaacggttacgcgaacggagccgccaacggaaacggaaacggaaacggaaacggtgcg
tcgcacaatggcgcctccaatggcagcgacgtcgccgcgcatgacgatgccgacggcggc
ggctatgcgcaactcagcagggacacgctgatcaacgcactcgaaaagacgggatgggtt
caggcgaaagccgctcgcatcctggggcttacgccgcgtcaggtgggctatgcgctcaaa
aagcacggcatcgagatgaaacgctactga
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