Rhodomicrobium lacus: QMO75_08555
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Entry
QMO75_08555 CDS
T09241
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rlac
Rhodomicrobium lacus
Pathway
rlac00500
Starch and sucrose metabolism
rlac01100
Metabolic pathways
rlac01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
QMO75_08555 (glgX)
Enzymes [BR:
rlac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
QMO75_08555 (glgX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_77
CBM_48
MalQ_N
Alpha-amylase
Isoamylase_C
ISOA1-3_C
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
WKW49354
LinkDB
All DBs
Position
1902573..1906721
Genome browser
AA seq
1382 aa
AA seq
DB search
MTAIRVGEGSPEPLGLTLDGRGANFAVFSAHATAIELCLFDASGEREVERIRLPARTGDV
WHCHIEGIGAGTRYGLRAHGPYDPASGHRFNPAKLLVDPYALALDRPFELHRSMFGYRPG
TDDLTRDDTDSAAAMPKAIAVDLLQIPSPTRAHATNGAPAILYELHVKGYTKRHPLVPEP
VRGTFAGLADPAAIAHLAKLGVTAVELLPSAAWIDERHLAAAGLTNYWGYNPVAFMTPDP
RLAPGGWAEVRAATDALHAADIEVIVDVVFNHTGEGDELGPTVSFRGLDNATYYRLRADD
ARFYVNDAGCGNILAADRPAVLRLIMDSLRAWATLGGVDGFRFDLATTLARRETGFDPHA
PLIAAIAQDPLLRRLRLIAEPWDIGPGGYRVGAFPTNWGEWNDKFRDGARRFWRGDSGLA
SEMATRFSGSQDIFAKRRPSASVNFVVAHDGFTLADLVAHEHKHNHANGEDNRDGTNDNI
SWNNGVEGATGDAAILAARRRDERALIATLLFARGTPMLVMGAETDQTQFGNNNAYAQDN
ETAWLDWAGADAALTAFTARAIALRKAHPALWRDRFLSGEPQDASGVPDVQWLSPTGAPM
RAEDWTRGNLHTVIAALYAPEAGGRAADRVLVALHAGRDPAGIALPEPREGFVWRAVIDS
SDETGEPRSASADGDAEIAPRSVVILTEEREAGERAKRRSPEPELLDRLAQVAGIAPDWY
DITGKRHVVPNETKRALLFDMGLPAETGGEARASLGQIVDERYRRRLPFSFVAREGETAG
LRIASDDRRAPRWLVVEREDGGEDAVALEEPVSETITAPDGRRVDTIRAPLPPLAPGRYT
LRLETHPDAACRLTVAPRRCYLPDQLRDGGKATGLAAQLYALRRDGDQGIGDFTTLGRIA
EDTAGAGYATLGLNPLHALFPSDRDRASPYYPSDRRFLDPLYIDVSALEGPRTRAAAAEH
TAAFAALSATPNVDYAGVWAAKRTVLEASFADFEATGDKARFNAFVAAGGAALAGFALFE
AIGETRPGEPWPAWPDALRNRHPSALASFAAEHAPRLRFHQWLQWIAETQLDEAARRGAD
AGLWLGFYRDLAVGAAPDGAEAWTNADQMLTHAAIGAPPDPLAEGGQNWGLRPPNPLAWS
RNGYDVFRGVIAANMRHAGALRIDHAMGLARLFVIPEGASGRDGAYIGFPVDDLIGELAL
ESRRARCVVIGEDLGTVPWGFRETMEAADVLSYRVFWFERHGEGFAPPRTYPAKSIACLS
THDLPTLKGWWEGEDIREKEALGLIAPDEAAAARERRAGDKAALIALLAAEGIEAAAAPD
TPFDPALTDAAHRLLGTASSLIAIEQIDDLAGETTAVNLPGTDRERPNWRRKLAAMPSLA
KR
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcgatccgcgtcggcgaaggctctcccgagccgcttggcctgacgctcgacggg
cgtggcgcgaactttgccgtgttctccgcgcacgcgaccgcaatcgagctttgcctgttc
gatgcgtctggggaacgcgaggtggagcgtatccgccttcccgcccgcacaggcgatgtg
tggcattgccacatcgaggggatcggcgctggcacgcgctacgggcttcgcgcacacggc
ccttatgatcccgcgagcggccatcgcttcaacccggcgaagttgctcgtcgacccttat
gcgctcgcgctcgaccgaccgttcgagcttcatcgctccatgttcggttatcggcccggc
accgacgatctgacgcgcgacgacaccgacagcgccgccgccatgccgaaggcaatcgcg
gtcgacctcctacaaatcccgtcgccaacgcgcgcccacgcgacgaacggcgcgcccgcg
atcctctacgaactgcacgtgaagggctacacgaagcgtcacccgctcgtgccggaaccc
gtgcgcggcaccttcgcgggcctcgccgaccccgccgccatcgcgcacctcgcgaagctc
ggcgtgacggcggttgaacttctgccctctgcggcctggatcgacgagcgccatctcgcg
gcggcgggcctgacgaattactggggctataaccccgtagccttcatgacaccggacccg
cgccttgcgcccggcggctgggctgaagtgcgcgccgccaccgatgccttgcacgctgcg
gacatcgaagtgatcgtggatgtcgtcttcaatcatacgggcgaaggcgacgaactcggc
ccgacggtcagctttcgcggcctcgacaacgccacctattaccgcctccgcgccgacgac
gcgcgcttctatgtgaacgacgcgggctgcggcaacatcctcgccgccgaccgccccgcc
gtgctgcgcctcatcatggacagccttcgcgcgtgggcgacgctcgggggcgtggacggc
ttccgcttcgatctcgcgacgacgctcgcccgccgcgaaacggggttcgacccgcacgcg
ccgctcatcgcggccatcgcgcaagacccgctcctgcgccgcctgcggctcatcgcagag
ccatgggacatcggtccgggcggctatcgggtgggcgctttccccacgaattggggcgag
tggaacgacaagttccgcgacggcgcgcgccgcttctggcgtggcgacagtgggcttgcg
tcggagatggcgacgcggttttccggctcgcaagacatattcgcaaagcgccgtccatcc
gccagcgtgaactttgtcgttgcgcatgacggtttcactcttgccgatctcgtcgcccac
gaacacaagcacaaccacgccaacggcgaagacaaccgcgacggcacgaacgacaacatc
tcctggaacaacggcgtcgagggcgcgaccggcgacgcggccatcctcgcggcgcggcgg
cgcgacgaacgcgcgcttatcgcaacgctcctgttcgcgcgcggcacgccgatgctcgtc
atgggcgcggaaaccgatcagacgcagttcggcaacaacaacgcctatgcgcaagacaat
gaaaccgcctggctcgactgggcgggcgccgacgcggcgctgacggcgttcaccgcgcgc
gcaatcgcgctgcgcaaggcgcatccggcgctgtggcgcgaccgctttctttccggtgaa
ccgcaagacgcaagcggcgtcccggacgtgcaatggctatcgccgaccggcgcgccgatg
cgggcggaagactggacgcgcggaaaccttcacaccgtgatcgctgcgctttacgcgccc
gaggcgggcggccgcgcggcagatcgcgtgctggtggcgcttcatgcggggcgagacccg
gcagggattgcgctgccggagccgcgcgagggcttcgtgtggcgcgccgtgatcgatagc
tcggacgaaaccggcgagccgcgaagcgcttcagcggatggggacgccgaaatcgcgccg
cgctcggttgtaatcctgacagaggaacgcgaagcgggcgagcgggccaagcgccgcagc
cccgagccggagcttctcgaccgcctcgcgcaggtggcgggcatcgcgccggattggtac
gacatcaccggcaagcgccatgttgtaccgaacgaaacgaagcgtgcgctcctcttcgac
atgggccttcccgccgaaacaggcggcgaagcgcgggcaagcctcggccaaatcgtcgat
gaacgctaccggcgcaggctgccattttcgttcgtcgcgcgcgagggggagaccgcaggg
cttcgcatcgcctccgacgatcggcgggcgcctcgctggctcgtcgtcgagcgcgaggat
ggcggcgaggacgccgtcgcgcttgaagaacccgtgtccgaaacgatcaccgcaccggac
ggccgccgcgtcgacacgatccgcgcgcctctgcccccgctcgcgcccggccgctatacg
ctccgcctcgaaacccatcccgacgccgcctgccgcctcacggtcgcgccgcgccgctgc
tatcttcccgaccagctccgcgacggcggaaaggcgaccggccttgccgcgcagctctat
gcgctccggcgcgatggcgatcagggcatcggcgatttcacgacgctgggccggatcgcc
gaagacacggcgggcgcgggctacgccacgctcgggctgaaccccttgcacgcgctgttt
ccaagcgaccgcgaccgtgccagcccttattatccctccgaccggcgcttcctcgatccg
ctttacatcgatgtctcggccctcgaaggcccgcgcacgcgcgccgcagctgcagagcac
accgccgcgtttgcagcgctttcagccacgccgaatgtggattacgcgggcgtctgggcc
gccaagcgcaccgttctggaagcgtcgttcgcggatttcgaggcgacgggcgacaaggca
cgcttcaacgccttcgtcgcggcggggggggcggcgctcgcagggttcgcgctgttcgag
gccatcggcgaaacccgccccggcgagccatggcccgcatggccggatgcgcttcgcaac
cgccatccgtcggcgctcgcgtccttcgcggcggaacatgcgccacggcttcgctttcat
caatggctgcaatggattgccgaaacgcagctcgacgaagcggcgcgacgcggcgccgac
gccgggctgtggctcggcttctatcgcgatcttgccgtgggcgcggctcccgacggcgcg
gaagcctggacgaatgccgaccagatgctcacgcacgcagccatcggcgcgccgcccgat
ccgctggccgaaggcggccagaactggggtcttcggccgccgaacccgctcgcctggtcg
cgcaacggctatgacgtgtttcgcggggtcatcgcggcgaacatgcgccacgcaggcgcc
cttcgcatcgaccacgcgatgggcctcgcgcggctgttcgtgatccccgagggcgcaagc
gggcgcgacggcgcctacatcggcttccccgtcgacgatctcatcggcgagctggcactc
gaaagccggcgcgcgcgctgcgtcgtcatcggcgaagacctcggcaccgtaccgtggggc
ttccgcgagacgatggaagccgcagacgtgttgagctatcgcgtgttctggttcgagcgc
cacggcgaaggcttcgctccgccccgcacttaccccgcgaagtccatcgcctgcctctcg
actcacgacttgccgacgctcaaaggctggtgggagggcgaggacatccgcgagaaggaa
gcgctgggcctcatcgcaccggacgaggcggctgcggctcgcgaacgccgagctggcgac
aaggctgcgctcatcgcgcttcttgcggcagagggtattgaagcggcagcagcgccggat
acgcctttcgatccggcgctgacggatgccgcacatcgcctgcttggcaccgcgtcttcg
ctcatcgccatcgagcagatcgacgacctcgcgggcgagacgaccgccgtcaacctgccc
ggcacggaccgcgagcgtccgaactggcggcgcaagctcgcggcgatgccctcgctcgcg
aagcgatag
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