Rhodomicrobium lacus: QMO75_11845
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Entry
QMO75_11845 CDS
T09241
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rlac
Rhodomicrobium lacus
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rlac03000
]
QMO75_11845
Transcription factors [BR:
rlac03000
]
Prokaryotic type
Helix-turn-helix
Other families
QMO75_11845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
AAA_2
AAA_5
HTH_30
Mg_chelatase
HTH_28
HTH_23
MCM
AAA
HTH_29
HTH_17
UPF0253
HTH_1
HTH_50
Motif
Other DBs
NCBI-ProteinID:
WKW49984
LinkDB
All DBs
Position
complement(2642236..2644191)
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AA seq
651 aa
AA seq
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MNQRAIRLAWEEFQQHGRKACVLPRAIAASWERSRSFGVGTALLRAPLADEAEIFRRRSL
NASFLAASRHALERSREMLRDAASMMILADRTGFVLETAGDGRVVEQGKGNALQTGGAWQ
ENAIGTNAIGTALAEQRPVKVTGAEHFCEDVQRWSCAAAPVHHPLDGELLGAVDISGPVA
TFNPQSLALAAAIGREIEATLEKAAKLDHEILLRHLLSKRSTWLSEDILVIDRRGHLVHS
TETAMRKIDTASPDDLPHVLRRIIGSASAEAWERNCRDRFPNAGLEIVEDDGEVAGCLIV
LLGKRSIPASPAVARAPRAAADAFDEIAGESAVMRDIRERARKLAANPLPVLIEGETGVG
KELFARAIKAASACASGPFVPVNCGGMARDLIASELFGYVKGAFTGADGNGRPGKIEKAD
GGILCLDEIGEMPMDLQSYLLRVLEDGIVYRVGDHEGRPVSIRLVSMTNRDLMEEVGAGR
FRRDLFYRIAAARLRIPPLRERGDDVLVLAERFAARTAARLGRPSPSFSADALMLLRLYG
WPGNVRELRNVIDAVLALCETDKIDVEHLPPEMRLCDKASRAAGAEPEAAAKPLTVLPSR
RGMKTPEREAILAEVEACGGNLTEAARRLGIARSTLYVRLAKYGVLRSPED
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcgcgcgatacgcctggcatgggaggagtttcagcaacacggtcgcaaggcg
tgcgttctgccgcgcgccatcgccgcttcatgggagcgatcacggtcctttggcgtcggc
acagccttgttgcgcgctccgctggcggacgaggcggaaatcttccgaaggcggtcgctg
aatgcgtctttcctcgcagcttcgcgtcacgcgctcgaacgctcgcgcgagatgttgcgc
gatgccgcgagcatgatgatactcgcggatcgaacgggctttgtcctcgaaactgccggg
gacggccgcgtggtcgaacagggcaagggcaacgcgctgcaaacgggcggagcgtggcaa
gagaatgccatcggcacgaacgccatcggcaccgcgctcgcagagcagcgcccggtgaag
gtgacgggagccgagcacttctgcgaggacgtccagcgctggagttgcgccgccgccccc
gtgcatcatcccctcgatggcgaactgctgggcgcagtcgacatctccggtcccgtggcg
accttcaatccgcaaagtcttgcgctggcggccgccatcggcagggagattgaagcgacg
ctcgaaaaggccgcgaagctcgaccacgagattttgctgcgtcatctgctttccaagcgg
tcgacgtggctcagcgaagatatccttgtgatcgatcggcgcggtcacctcgtccattcc
accgaaaccgcgatgcgcaagatcgataccgcttcgcctgacgatctgcctcacgtgctt
cgccgcatcatcggttctgcttccgccgaagcgtgggagcgcaattgccgcgaccgcttt
cccaatgcgggcctcgaaatcgtggaggatgacggcgaagtcgccggttgtttgatcgtg
ctgctcggcaagcgcagcattcccgcgagcccggccgtcgcccgcgcgccgcgggccgcc
gccgatgcgtttgacgagatcgcgggcgaaagcgccgtgatgcgcgatattcgcgagcgc
gcgcggaagctggccgcgaacccgctgccggtgctgatcgagggcgaaacgggcgtcggc
aaggagttgtttgcccgtgcgatcaaggcggcgagcgcatgcgcaagcggccccttcgtg
ccggtgaactgcggcggcatggcgcgcgacctcatcgcgagcgaactgttcggctatgtg
aaaggggcgttcacgggcgcggacggcaatggcaggccgggcaagatcgagaaggccgac
ggcggcatcctctgcctcgacgaaatcggcgaaatgccgatggacctgcaatcctatctg
ctgcgcgtgctggaagacggaatcgtttatcgcgtcggcgatcacgagggccgccccgtt
tccatccggctcgtgtccatgacaaatcgcgacctgatggaggaggtgggcgcggggcgc
ttccgccgcgacctgttctatcggattgccgccgcgcgccttcgcattccgccgttgcgg
gaacggggcgacgatgtgctcgtcctcgccgagcgcttcgccgcaagaacggcggcgcgg
ctcggtcgcccatcgccttctttctcggccgacgctctgatgctgcttcgcctctacggg
tggccgggcaatgtccgcgagctgcgcaacgtgatcgacgcggttcttgcgctttgcgaa
accgacaagatcgacgtcgagcatctcccgccggaaatgcgcctgtgcgacaaggcttcc
cgcgcggcaggcgcggaaccggaagctgccgcaaagcctttaaccgtcctcccgtctcgg
cgtggcatgaagacgcccgagcgcgaggccatccttgcggaagtcgaagcatgcggcggc
aaccttaccgaagcggcccgccgtctcggcatcgcgcgctcgacgctctatgtgcggctt
gcgaaatacggcgtcttgcgctcgcccgaggactga
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