Rhodomicrobium lacus: QMO75_13725
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Entry
QMO75_13725 CDS
T09241
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rlac
Rhodomicrobium lacus
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlac03400
]
QMO75_13725
Enzymes [BR:
rlac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
QMO75_13725
DNA repair and recombination proteins [BR:
rlac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
QMO75_13725
Prokaryotic type
QMO75_13725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WKW50329
LinkDB
All DBs
Position
3062558..3064006
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AA seq
482 aa
AA seq
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MTASSRSAPALVLFRRDLRLADHPALSSAAATGAPVIPVYILDNETPGRWRPGGASRWWL
HQSLRSLASDLEARGSRLVLRRGDTERALLDLIEETGAHSVFFTRGYEPFQRALEGRLKS
SLEARGVSLRRFGGQILVEPESLANLAGEPFRVFTPFFRALSQRGAPSTPPPPDTLAAPD
RWPRSDVLESWSLEPTKPDWAGGLRAAWAPGEKAARDRLALFIETGLPSYPARRDQPGTD
GTSRLSPHLAFGEIGPRQIWHAVKAAAEAGGDEAAAEAYLREVGWREFSYHLLFHFPHLP
DEPFRPEFAAFPWRDDIDALEAWRRGRTGFPIVDAGMRQLWQTGWMHNRVRMVVASFLIK
HLLLPWQTGEDWFWDTLVDADLANNAASWQWVAGSGADAAPYFRIFNPVLQGEKFDARGE
YVRAFVPELARLPASLVHKPWTASATALREAGVTLGETWPHPIVEHTAARARALAAFAFV
KK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttcatcgcgttccgccccggccctcgttcttttccggcgcgacttgcgcctt
gccgatcatcctgccctctcttctgcggccgctacgggtgcgccggtcatccctgtctac
attctggataatgagacgccgggccgctggcgccctggcggtgcgagccgctggtggctt
catcagtcgctcaggtccctcgcgtcggatcttgaagcgcgcggttcgcggttggtgcta
cggcgcggggataccgagcgcgcgctgctcgacctgatcgaggaaaccggcgcgcactcc
gtttttttcacgcgtggctacgagccttttcagcgtgcgctggaagggcgattgaaatcc
tcgctcgaagcgcgcggggtttcgttgcggcgtttcggcgggcaaatccttgtcgagccg
gaaagcctcgcgaatctcgcgggcgagccgtttcgcgtgttcaccccattcttccgcgcc
ctgtcgcagcgcggcgcaccttccacgccgccgccgccggacacactcgccgcgccagac
cgctggccccgctccgatgttctggaaagctggtcccttgaaccgacgaaaccagactgg
gcaggcggcctgcgcgccgcgtgggcgcccggcgaaaaggcggcgcgggatcggctcgcc
ctcttcatagagaccgggctgccgtcctacccggcacggcgcgaccaacccggcacagat
ggtacatcgcgcctgtcgccccatctggcgttcggcgagatcgggccgcgccagatctgg
cacgctgtgaaagcggcggcggaagcgggcggcgatgaagcggcagccgaggcttatctg
cgcgaagtcggctggcgggagttttcgtatcacctgctgttccacttcccgcatctgccc
gacgagccgttccgccccgagtttgccgccttcccatggcgtgacgacatcgatgcactc
gaagcgtggcggcgcgggcggacgggatttcccatagtggacgccggaatgcgccaactt
tggcagaccgggtggatgcacaaccgcgtgcggatggtcgtcgcctcattcctcatcaag
catctgcttctgccgtggcagaccggcgaggactggttctgggatacgctcgtcgacgcg
gatctcgcgaacaacgccgcaagctggcagtgggtggcggggtccggcgcggatgccgcg
ccctatttccgcatcttcaatcccgtgcttcagggcgagaaattcgacgcgcgcggcgaa
tacgtgcgcgccttcgtgcccgaactcgccaggcttcccgcctcgcttgtccataaacca
tggacggcgagcgcgacggcgctgcgtgaagccggcgtcactctcggcgaaacctggccg
caccccatcgtcgagcacacggcggcgcgggcaagagcgctcgccgccttcgcgttcgtg
aagaaatag
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