Rhodomicrobium lacus: QMO75_13775
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Entry
QMO75_13775 CDS
T09241
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rlac
Rhodomicrobium lacus
Pathway
rlac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QMO75_13775 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlac03400
]
QMO75_13775 (mutM)
Enzymes [BR:
rlac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QMO75_13775 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QMO75_13775 (mutM)
DNA repair and recombination proteins [BR:
rlac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QMO75_13775 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
WKW50338
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All DBs
Position
complement(3070023..3070910)
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AA seq
295 aa
AA seq
DB search
MPELPEVEIVRRGLAPAMEGAAFSAVTLNRADLRFPFVPHFAERLRGQHIARLARRAKYI
VVETDSGLCLAMHLGMTGRFTIERHSDGAGVTPGSFYYGHPADARHDHVVFAMSNGEVIR
YNDPRRFGYMTLFDAGEMAVHPLFRGLGIEPLSDALTPDYLAARAAGKAQALKAFLLDQR
IIAGLGNIYVCEALFRAGLPPDAEAGALGVGRRGKAAAARLCTAIKAVLKDALLAGGSSI
RDYRHADGDGGHFQEKFDVYGRGGEPCHNGCGSNIARKAQQGRSTFFCPRCQAKI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcccgaagtcgagatcgtccggcgcggcctcgcccccgcgatggagggc
gccgcgttctccgccgtgacgctcaaccgcgccgaccttcgctttcccttcgtgccgcat
ttcgccgagcgcctgcgcgggcagcacatcgcgcgtctcgcgcgtcgggcgaagtacatc
gtggtggagaccgacagcggcctctgcctcgcgatgcatctcggcatgacgggtcgcttc
accatcgagcgccattccgacggcgcaggggttacgcccggctcgttttactacgggcat
ccagccgacgcgcgccacgaccacgtcgttttcgcgatgagcaacggcgaagtgatccgt
tacaacgacccgcgccgcttcggttacatgacactgttcgacgcgggcgagatggcggtg
catcccctctttcgcgggctcgggatcgagccgctgtccgatgcgctgacgccggactat
ctcgctgcgcgcgcggcggggaaggcacaggcgctgaaggccttcctcctcgaccagcgt
atcatcgcggggcttggcaacatctatgtttgcgaggcgctgtttcgggcggggctgccg
cccgatgccgaggcgggggcgctcggcgtcggcaggcgaggcaaggcggccgccgctcgg
ctctgcacggcgatcaaggccgtactcaaagacgcgctcctggcgggtggttcctcgatc
cgcgattaccgccacgccgacggcgacggcggccattttcaggagaagttcgacgtctat
gggcgcggcggcgagccgtgtcataatggctgcggttcgaacatcgcaagaaaagcccaa
cagggacgctcgacctttttctgcccgcgctgtcaggcaaaaatctga
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