Rhodomicrobium lacus: QMO75_14920
Help
Entry
QMO75_14920 CDS
T09241
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rlac
Rhodomicrobium lacus
Pathway
rlac03030
DNA replication
rlac03430
Mismatch repair
rlac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QMO75_14920 (dnaE)
03430 Mismatch repair
QMO75_14920 (dnaE)
03440 Homologous recombination
QMO75_14920 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlac03032
]
QMO75_14920 (dnaE)
03400 DNA repair and recombination proteins [BR:
rlac03400
]
QMO75_14920 (dnaE)
Enzymes [BR:
rlac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QMO75_14920 (dnaE)
DNA replication proteins [BR:
rlac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QMO75_14920 (dnaE)
DNA repair and recombination proteins [BR:
rlac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QMO75_14920 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
T2SSK
Motif
Other DBs
NCBI-ProteinID:
WKW50552
LinkDB
All DBs
Position
3309099..3312554
Genome browser
AA seq
1151 aa
AA seq
DB search
MTKPGFIHLHVHSAYSLLEGALPVKALIKAAAADNQPALAITDRNNLFGALEFSEYMAGE
GIQPIIGCALTLAFPAPADETPRPGARPAANTGTVVVLAKDAEGYGNLMRLSSQAFLDSG
DGSKPHVELDFLAEHARGLIALSGGPDGPADRAFAAGNAAVAEARLAALAESFGDRFYVE
IQRHGLARERAVEPQLLRWAYDNGVPLVATNEAYFPKRAVFEAHDALLCIAEGRYVAEDD
RRRLSPDHWLKPQADMVKLFADLPEAVANTIEIAQRCAFRPRPRKPILPQFVIGSEDTHE
AEAAELRKQAQEGLARRLAVIPENQRAASVEDYEKRLEFELDVITRMKFPGYFLIVSDFI
KWAKAHGIPVGPGRGSGAGSVVAWSLTITDLDPIRFGLLFERFLNPERVSMPDFDIDFCQ
DRRDEVIQYVRGKYGANRVAQIITYGKLQARAVLRDVGRVLQMPYGQVDRLCKLVPNNPA
NPVTLAEAIEGEPKLQEARDGEEIVAQLLDTAQKLEGLYRHASTHAAGVVIGDRDLVELV
PLYRDPKSDMLVTQFNMKWVEQAGLVKFDFLGLKTLTVLQKACALLEKAGRPIDLGHLPL
DDRPTYEMLAKGDTGGVFQLESTGMREALRKLKPDRFGDIIAMVALYRPGPMDNIETYVN
RKHGIEVPDYLHPLAQPILEETYGVIIYQEQVMQLAQVLSGYSLGEADLLRRAMGKKIKA
EMDAQGARFVKGALEKDIPEARARYIFELVAKFAGYGFNKSHAAAYALIAYQTAYLKANH
PQEFIAASMTLDMANTDKLYGFTREARQNGLAILPPSVNRSAVEFEPEGDDAIRYALAAL
KNMGHAAAAHIVEERGDRPFLDLADFMLRINPKAVNKRAIETLNAAGAFSDMEPNRAKVA
KNLDRLVEFGAKAAEDRARGQVDMFGGGIAGGPAPRLDLAEAPEWSLVEKLENELGAAGF
YLSGHPLDDFTDQLARMNVLKWSDFSARVQAHGRAESRLAATVTYRQDRKAKSGNRFAFA
GFSDPTGQFEAVIFSDTLNVAGDKLEAGKNVLVHVEGEADGEAIKVRVQAVQALDDVLGK
TTKQLSITATERLQVAELVKHLGREGGIQVNLVVQIPEAQKAVEFKLGDNFSISARQLAT
LKTLPGVLQVG
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaccgggcttcatccaccttcacgtccattcggcctattcgctgctcgaaggc
gcgctgccggtcaaggcgctcatcaaggccgccgccgccgataaccagccggcgcttgcg
atcaccgaccgcaacaatcttttcggcgcgctcgaattctccgaatacatggcgggggaa
ggcatccagccgatcatcggctgcgcgctgacgctcgcctttcccgcgcccgccgacgag
acgccgcgccccggtgcgcgccccgccgcgaacacgggcactgtcgttgtgctcgcgaag
gacgcggagggctacggcaacctcatgcgtttgtccagccaggcgtttctcgattccggc
gacggctcgaagccgcatgtcgaactcgattttctcgcggaacacgcgcgcggcctcatc
gccctgtcaggtggccccgacggcccggcggatcgcgctttcgctgccggaaacgcagcc
gtcgcggaagcgcgtcttgcggcgctcgcggagtcgttcggcgaccgtttctatgtcgaa
atccagcgccacgggctcgcccgcgagcgcgcggtggagccgcagctcctgcgctgggcc
tatgacaatggcgtgccgctcgtcgccaccaatgaagcctatttcccgaagcgcgcggtt
ttcgaggcgcacgacgcgctgctttgcatcgccgaggggcgctacgtcgccgaagacgat
cgccgccgcctctcgcccgatcactggctgaagccgcaagccgacatggtgaagctgttc
gcggacctgcccgaggcggtcgcgaacaccatcgagattgcgcagcgctgcgcctttcgc
ccgcgcccgagaaagccgatccttccgcaattcgtgatcggcagcgaggacacgcacgag
gccgaagccgcggagcttcgcaagcaggcgcaggaggggctcgcgcgccgcctcgccgtc
atcccggagaaccagcgcgcggcgagcgtcgaggattacgagaagcgcctcgaattcgaa
ctcgacgtcatcacgcgcatgaagtttcccggctacttcctgatcgtgtccgacttcatc
aaatgggcgaaggcgcacggcatccccgttgggccggggcgcggctcgggcgcgggttcg
gtcgtcgcgtggtcgctcaccatcaccgatctcgacccgatccgcttcggcctcctgttc
gagcgcttcctcaacccggaacgcgtgtcgatgccggacttcgacatcgacttctgccag
gatcgccgcgacgaggtgatccagtatgtgcgcgggaaatacggagcgaaccgcgtcgcg
cagatcatcacctacggaaagcttcaggcgcgcgctgtgcttcgcgacgtgggccgcgtg
ctgcaaatgccctatgggcaggtggaccggctctgcaagctcgtgccgaacaacccggca
aacccggtcacgctcgcggaggccatcgagggcgagccgaagcttcaggaagcgcgagac
ggcgaggaaatcgtcgcccagcttctcgacaccgcgcagaagctcgaagggctctatcgc
cacgcatcgacgcacgcggcgggcgtggtgatcggcgatcgcgacctcgtggagcttgtg
ccgctttatcgcgatccgaagtccgacatgctcgtcacccagttcaacatgaagtgggtg
gagcaggcggggctcgtgaagttcgacttcctcggcctgaagacgctgaccgttctgcag
aaggcgtgcgcgctgctggagaaggcgggcagacccatcgacctcggccatctgccgctc
gacgaccggccgacctatgaaatgctggcgaagggtgatacgggcggcgtgttccagctc
gaaagtacgggcatgcgcgaggcattgcgcaagctgaagcccgaccgcttcggcgacatc
atcgccatggtggcgctctaccgccccggcccgatggacaacatcgagacctacgtcaac
cgcaagcacggcatcgaggtgccggactatctgcatccgctcgcgcagcccatcctcgaa
gagacctacggcgtcatcatctatcaggaacaggtgatgcagctcgcgcaggtgctgtcg
ggctacagccttggcgaagccgacctgctgcgccgcgcgatgggcaagaagatcaaggcg
gaaatggatgcgcagggcgcgcgcttcgtgaagggcgcgctggaaaaggacattcccgag
gcccgcgcgcgctacatcttcgagcttgtggcgaagttcgcgggctacggcttcaacaag
agccatgccgccgcttatgcgctgattgcctatcagacggcgtacctgaaggcgaaccac
ccgcaggagttcatcgccgcgtcgatgacgctcgacatggcgaacacggacaagctctac
ggcttcacgcgcgaggcccggcaaaacggtcttgcgatcctgccgccctcggtcaacagg
tcggcggtcgagttcgaacccgagggcgacgacgccattcgctacgctctcgccgccctc
aagaacatggggcacgcagcggcagctcacatcgtggaggagcgcggcgacaggccattt
ctcgatctcgccgacttcatgctccgcatcaacccgaaggcggtgaacaagcgcgccatc
gagacgctgaacgcggcgggcgctttttcggacatggagccgaaccgcgcgaaggtggcg
aagaacctcgaccggctcgtggagtttggcgcaaaggccgccgaagatcgcgcgcgcggg
caagtggacatgttcggcggcgggatcgcgggcggccccgcgccgcgcctcgacctcgcg
gaagcgcccgaatggagcctcgtcgaaaagctcgaaaacgagcttggcgcggcgggcttc
tacctctccggtcacccgctcgacgatttcaccgaccagctcgcccgcatgaacgtgctg
aaatggagcgatttttcagcgcgcgtgcaggcgcatggccgcgcggagtcgcggcttgcg
gcaaccgtcacctatcggcaggaccgcaaggccaagtccggcaaccgcttcgcgtttgcg
ggcttctccgatccgaccggccaattcgaagccgtcatcttctccgacacgctgaatgtg
gcgggcgacaagctcgaagcgggcaagaacgtgctcgttcacgtggagggcgaggccgac
ggcgaggcgatcaaggtgcgcgtgcaggccgtgcaggcgctggacgacgtgctcggcaag
accacgaagcagctttccatcaccgcgacggagcgcctgcaggtggccgaactcgtgaag
catctcggccgcgagggcggcatccaggtgaacctcgtggtgcagatccccgaggcgcaa
aaggccgtggagttcaagctcggcgacaatttctcgatttccgcgcgccagctcgccacg
ctgaagacgctgccgggcgtgttgcaggtggggtaa
DBGET
integrated database retrieval system
